Detail information of GWHGAAEX002394/evm.TU.scaffold_12.170


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|226313622|ref|YP_002773516.1|4.00E-31nucleotidase [Brevibacillus brevis NBRC 100599]
nrgi|672112686|ref|XP_008807163.1|3.52E-167PREDICTED: uncharacterized protein LOC103719612 [Phoenix dactylifera]
trEMBLtr|D7TZV8|D7TZV8_VITVI3.00E-160Putative uncharacterized protein {ECO:0000313|EMBL:CBI35904.3}
TAIRAT1G728801.00E-147Survival protein SurE-like phosphatase/nucleotidase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000976361277666252+
Transcript Sequence

Network for GWHGAAEX002394

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01975.16SurE622539.50E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03787surE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
Pyrimidine metabolismmap00240
Nicotinate and nicotinamide metabolismmap00760

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.530
SRR2545915Juvenile tuber11.730
SRP108465SRR5643513five period of Gastrodia elata18.100
SRR5643514five period of Gastrodia elata22.180
SRR5643515five period of Gastrodia elata18.900
SRR5643524five period of Gastrodia elata22.370
SRR5643525five period of Gastrodia elata12.560
SRR5643528five period of Gastrodia elata19.500
SRR5643658five period of Gastrodia elata15.810
SRR5643659five period of Gastrodia elata14.450
SRR5643660five period of Gastrodia elata16.730
SRR5643661five period of Gastrodia elata15.160
SRR5643662five period of Gastrodia elata17.330
SRR5643663five period of Gastrodia elata12.770
SRR5643664five period of Gastrodia elata11.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.970
SRR6049655Rhizomagastrodiae_C368-T10_good_123.350
SRR6049656Rhizomagastrodiae_C368-T07_good_123.480
SRR6049657Rhizomagastrodiae_C368-T07_good_116.450
SRR6049658Rhizomagastrodiae_C368-T04_good_116.990
SRR6049659Rhizomagastrodiae_C368-T04_good_113.310
SRR6049660Rhizomagastrodiae_C368-T01_good_117.200
SRR6049661Rhizomagastrodiae_C368-T04_good_113.660
SRR6049662Rhizomagastrodiae_C368-T01_good_123.870
SRR6049663Rhizomagastrodiae_C368-T01_good_123.500
SRR6049664Rhizomagastrodiae_C368-T10_good_129.430
SRR6049665Rhizomagastrodiae_C368-T10_good_129.430
SRP279888GastroGastrodia elata tuber 21.87
JuvenJuvenile tuber26.44
Mother_GastroMother tuber of Gastrodia elata 32.39
Mother_JuvenMother tuber of Juvenile 24.77