Detail information of GWHGAAEX002403/evm.TU.scaffold_12.179


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297565110|ref|YP_003684082.1|9.00E-14Kelch repeat-containing protein [Meiothermus silvanus DSM 9946]
KOGKOG10727.00E-153FOG: Kelch repeat
nrgi|672173399|ref|XP_008806831.1|0PREDICTED: F-box/kelch-repeat protein At5g60570-like [Phoenix dactylifera]
Swissprottr|Q9FKJ0|FK132_ARATH2.00E-153F-box/kelch-repeat protein At5g60570
trEMBLtr|C5YG46|C5YG46_SORBI0Putative uncharacterized protein Sb06g028820 {ECO:0000313|EMBL:EES11439.1}
TAIRAT5G605707.00E-153Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000978750737877216+
Transcript Sequence

Network for GWHGAAEX002403

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01344.24Kelch_12853312.50E-08
PF01344.24Kelch_13333785.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.690
SRR2545915Juvenile tuber12.610
SRP108465SRR5643513five period of Gastrodia elata23.290
SRR5643514five period of Gastrodia elata27.190
SRR5643515five period of Gastrodia elata20.840
SRR5643524five period of Gastrodia elata19.170
SRR5643525five period of Gastrodia elata10.500
SRR5643528five period of Gastrodia elata7.020
SRR5643658five period of Gastrodia elata11.200
SRR5643659five period of Gastrodia elata17.170
SRR5643660five period of Gastrodia elata14.060
SRR5643661five period of Gastrodia elata10.540
SRR5643662five period of Gastrodia elata10.050
SRR5643663five period of Gastrodia elata12.400
SRR5643664five period of Gastrodia elata11.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.920
SRR6049655Rhizomagastrodiae_C368-T10_good_128.580
SRR6049656Rhizomagastrodiae_C368-T07_good_135.160
SRR6049657Rhizomagastrodiae_C368-T07_good_141.460
SRR6049658Rhizomagastrodiae_C368-T04_good_132.370
SRR6049659Rhizomagastrodiae_C368-T04_good_131.890
SRR6049660Rhizomagastrodiae_C368-T01_good_132.670
SRR6049661Rhizomagastrodiae_C368-T04_good_137.870
SRR6049662Rhizomagastrodiae_C368-T01_good_127.570
SRR6049663Rhizomagastrodiae_C368-T01_good_116.480
SRR6049664Rhizomagastrodiae_C368-T10_good_127.710
SRR6049665Rhizomagastrodiae_C368-T10_good_127.710
SRP279888GastroGastrodia elata tuber 14.44
JuvenJuvenile tuber28.01
Mother_GastroMother tuber of Gastrodia elata 6.61
Mother_JuvenMother tuber of Juvenile 12.29