Detail information of GWHGAAEX002406/evm.TU.scaffold_12.181


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|379012008|ref|YP_005269820.1|5.00E-26serine/threonine-protein kinase PrkC [Acetobacterium woodii DSM 1030]
KOGKOG11872.00E-133Serine/threonine protein kinase
nrgi|743803471|ref|XP_010926928.1|0PREDICTED: putative serine/threonine-protein kinase isoform X2 [Elaeis guineensis]
Swissprottr|C0LGH3|Y5614_ARATH5.00E-105Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor)
trEMBLtr|M0S478|M0S478_MUSAM2.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P01370_001}
TAIRAT1G166702.00E-133Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000979873338024243-
Transcript Sequence

Network for GWHGAAEX002406

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr523182.60E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.370
SRR2545915Juvenile tuber20.470
SRP108465SRR5643513five period of Gastrodia elata14.040
SRR5643514five period of Gastrodia elata13.180
SRR5643515five period of Gastrodia elata17.940
SRR5643524five period of Gastrodia elata13.890
SRR5643525five period of Gastrodia elata11.680
SRR5643528five period of Gastrodia elata12.700
SRR5643658five period of Gastrodia elata8.290
SRR5643659five period of Gastrodia elata13.260
SRR5643660five period of Gastrodia elata12.030
SRR5643661five period of Gastrodia elata12.540
SRR5643662five period of Gastrodia elata11.350
SRR5643663five period of Gastrodia elata10.560
SRR5643664five period of Gastrodia elata7.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.380
SRR6049655Rhizomagastrodiae_C368-T10_good_115.480
SRR6049656Rhizomagastrodiae_C368-T07_good_114.250
SRR6049657Rhizomagastrodiae_C368-T07_good_113.290
SRR6049658Rhizomagastrodiae_C368-T04_good_115.060
SRR6049659Rhizomagastrodiae_C368-T04_good_117.420
SRR6049660Rhizomagastrodiae_C368-T01_good_115.150
SRR6049661Rhizomagastrodiae_C368-T04_good_114.240
SRR6049662Rhizomagastrodiae_C368-T01_good_114.370
SRR6049663Rhizomagastrodiae_C368-T01_good_113.670
SRR6049664Rhizomagastrodiae_C368-T10_good_114.990
SRR6049665Rhizomagastrodiae_C368-T10_good_114.990
SRP279888GastroGastrodia elata tuber 10.66
JuvenJuvenile tuber9.25
Mother_GastroMother tuber of Gastrodia elata 33.21
Mother_JuvenMother tuber of Juvenile 22.33