Detail information of GWHGAAEX002411/evm.TU.scaffold_12.188
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427739450|ref|YP_007058994.1| | 9.00E-60 | sucrose-6F-phosphate phosphohydrolase [Rivularia sp. PCC 7116] |
| nr | gi|672109432|ref|XP_008790096.1| | 0 | PREDICTED: sucrose-phosphatase 2-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q5IH14|SPP1_TOBAC | 0 | Sucrose-phosphatase 1 |
| trEMBL | tr|M0TL68|M0TL68_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P27320_001} |
| TAIR | AT1G51420 | 2.00E-165 | sucrose-phosphatase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000009 | 8096328 | 8115481 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002411
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05116.12 | S6PP | 9 | 261 | 1.40E-96 |
| PF08472.9 | S6PP_C | 262 | 394 | 2.60E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07024 | SPP | Biosynthesis of secondary metabolites | map01110 |
| Starch and sucrose metabolism | map00500 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005986 | Biological Process | sucrose biosynthetic process |
| GO:0050307 | Molecular Function | sucrose-phosphate phosphatase activity |
| GO:0000287 | Molecular Function | magnesium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.540 |
| SRR2545915 | Juvenile tuber | 33.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.120 |
| SRR5643514 | five period of Gastrodia elata | 5.380 | |
| SRR5643515 | five period of Gastrodia elata | 7.700 | |
| SRR5643524 | five period of Gastrodia elata | 4.520 | |
| SRR5643525 | five period of Gastrodia elata | 13.010 | |
| SRR5643528 | five period of Gastrodia elata | 11.260 | |
| SRR5643658 | five period of Gastrodia elata | 13.810 | |
| SRR5643659 | five period of Gastrodia elata | 7.390 | |
| SRR5643660 | five period of Gastrodia elata | 10.460 | |
| SRR5643661 | five period of Gastrodia elata | 9.300 | |
| SRR5643662 | five period of Gastrodia elata | 12.500 | |
| SRR5643663 | five period of Gastrodia elata | 8.720 | |
| SRR5643664 | five period of Gastrodia elata | 13.540 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.860 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.250 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.350 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.210 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.080 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.020 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.970 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.640 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.11 |
| Juven | Juvenile tuber | 5.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.97 | |
| Mother_Juven | Mother tuber of Juvenile | 5.74 |