Detail information of GWHGAAEX002413/evm.TU.scaffold_12.190


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291279824|ref|YP_003496659.1|7.00E-32signal transduction protein [Deferribacter desulfuricans SSM1]
nrgi|719985756|ref|XP_010251493.1|2.80E-116PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like [Nelumbo nucifera]
Swissprottr|Q9LEV3|CBSX3_ARATH1.00E-108CBS domain-containing protein CBSX3, mitochondrial (Precursor)
trEMBLtr|A0A068U673|A0A068U673_COFCA1.00E-114Coffea canephora
TAIRAT5G108605.00E-108Cystathionine beta-synthase (CBS) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000981480548159699-
Transcript Sequence

Network for GWHGAAEX002413

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS741194.10E-07
PF00571.27CBS1311862.00E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms120.600
SRR2545915Juvenile tuber158.500
SRP108465SRR5643513five period of Gastrodia elata128.680
SRR5643514five period of Gastrodia elata142.660
SRR5643515five period of Gastrodia elata133.920
SRR5643524five period of Gastrodia elata135.380
SRR5643525five period of Gastrodia elata181.760
SRR5643528five period of Gastrodia elata147.870
SRR5643658five period of Gastrodia elata200.940
SRR5643659five period of Gastrodia elata134.540
SRR5643660five period of Gastrodia elata148.890
SRR5643661five period of Gastrodia elata145.470
SRR5643662five period of Gastrodia elata137.260
SRR5643663five period of Gastrodia elata139.380
SRR5643664five period of Gastrodia elata142.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1201.550
SRR6049655Rhizomagastrodiae_C368-T10_good_1200.940
SRR6049656Rhizomagastrodiae_C368-T07_good_1213.380
SRR6049657Rhizomagastrodiae_C368-T07_good_1205.300
SRR6049658Rhizomagastrodiae_C368-T04_good_1184.580
SRR6049659Rhizomagastrodiae_C368-T04_good_1182.850
SRR6049660Rhizomagastrodiae_C368-T01_good_1181.480
SRR6049661Rhizomagastrodiae_C368-T04_good_1161.140
SRR6049662Rhizomagastrodiae_C368-T01_good_1203.010
SRR6049663Rhizomagastrodiae_C368-T01_good_1188.370
SRR6049664Rhizomagastrodiae_C368-T10_good_1207.700
SRR6049665Rhizomagastrodiae_C368-T10_good_1207.700
SRP279888GastroGastrodia elata tuber 167.56
JuvenJuvenile tuber165.64
Mother_GastroMother tuber of Gastrodia elata 115.55
Mother_JuvenMother tuber of Juvenile 114.47