Detail information of GWHGAAEX002423/evm.TU.scaffold_12.200


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122085|ref|XP_008784363.1|1.89E-111PREDICTED: ethylene-responsive transcription factor 1-like [Phoenix dactylifera]
Swissprottr|Q6K7E6|ERF1_ORYSJ2.00E-67Ethylene-responsive transcription factor 1
trEMBLtr|D5L139|D5L139_MALDO6.00E-97AP2 domain class transcription factor {ECO:0000313|EMBL:ADE41148.1}
TAIRAT1G539101.00E-53related to AP2 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000983753398378682+
Transcript Sequence

Network for GWHGAAEX002423

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP21171651.20E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.920
SRR2545915Juvenile tuber73.890
SRP108465SRR5643513five period of Gastrodia elata193.820
SRR5643514five period of Gastrodia elata292.330
SRR5643515five period of Gastrodia elata159.810
SRR5643524five period of Gastrodia elata208.030
SRR5643525five period of Gastrodia elata151.760
SRR5643528five period of Gastrodia elata133.150
SRR5643658five period of Gastrodia elata144.420
SRR5643659five period of Gastrodia elata85.140
SRR5643660five period of Gastrodia elata68.210
SRR5643661five period of Gastrodia elata66.610
SRR5643662five period of Gastrodia elata73.550
SRR5643663five period of Gastrodia elata71.960
SRR5643664five period of Gastrodia elata71.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1142.760
SRR6049655Rhizomagastrodiae_C368-T10_good_1150.440
SRR6049656Rhizomagastrodiae_C368-T07_good_1184.330
SRR6049657Rhizomagastrodiae_C368-T07_good_198.770
SRR6049658Rhizomagastrodiae_C368-T04_good_1110.700
SRR6049659Rhizomagastrodiae_C368-T04_good_1103.220
SRR6049660Rhizomagastrodiae_C368-T01_good_1201.020
SRR6049661Rhizomagastrodiae_C368-T04_good_1108.070
SRR6049662Rhizomagastrodiae_C368-T01_good_1264.950
SRR6049663Rhizomagastrodiae_C368-T01_good_1322.750
SRR6049664Rhizomagastrodiae_C368-T10_good_1274.960
SRR6049665Rhizomagastrodiae_C368-T10_good_1274.960
SRP279888GastroGastrodia elata tuber 58.05
JuvenJuvenile tuber126.45
Mother_GastroMother tuber of Gastrodia elata 73.63
Mother_JuvenMother tuber of Juvenile 67.29