Gene detail

Detail information of GWHGAAEX002424/evm.TU.scaffold_12.201

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1888	Putative phosphoinositide phosphatase
nr	gi\|743840510\|ref\|XP_010937281.1\|	PREDICTED: phosphoinositide phosphatase SAC2 [Elaeis guineensis]
Swissprot	tr\|Q7XZU2\|SAC3_ARATH	Phosphoinositide phosphatase SAC3
trEMBL	tr\|M0RJ13\|M0RJ13_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P17380_001}
TAIR	AT3G43220	Phosphoinositide phosphatase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000009	8411077	8458691	-

Transcript Sequence
>GWHTAAEX002424 AACAGTCGTTTATCGCTATCGTTCTAGCAATTTTGTGAACTGAGAATTCCAAAAAACTTGTTGTGCTTATCCTTCGCTCCCCGTGCATTTCTTCTTTACCTCTCCGCCGAACCTAAAGAATATAGTATTTTCGATATTGTCTCTCTCTCTCTCTCTTTTGTACTGTGGATTCTCCAGCTTCCCTTTCCTCCCGCAGTTTTCATATAGTTTATTCAAGTGAGCGGCCAGCTTTAGATTTGATTGTTTCGGAAATGTTGTACCCGAAGAAGGAGAACAGCGATCTAGGGTTTGAGTTGATTGGCGGGAGCTTGATGCGCGCATGAGCTGAGACGCCAGACTTGGCTGGAATTCGGATCTGATGGCAGCGGGAGTGGAAGAGGGAGATTTTGTTGGGGCTGTGGGGACTGGCGCTAAGAACCTGTACCTTCAAAAGTTTAAGCTTTTTGAAACTCGATCAAAATTTTATATGGTTGGATGGGACAAGAGTGGAACAATCTGGAGAGTGTTGTCACTTGACAGAGACGAACCTTGTGAGCTCAGTATGAGAGAGGATCCTACAATCTACTCAAAAAATGAGTGTGAAGAGTTGTTGAAGAGAATAGATGATGGAAACAAATCAAGTGGAGGGCTTAGGCTCGTCACACAGTGTTATGGAATTGTTGGTTTTGTTAAGTTTTTGGGGCCTCATTACTTGTTGCTAATAACAAAAAGGAGAAAAATTGGCTCCATATGTGGCCACACGGTCTTTGCTATCTCTAAGTACGAGATGATCGCAATTCCAAATTCCTCATTATGGCGTCGTATGAGATTTTCGAAGCACGAGGAAAGGTACAAGAGGCTACTTTGCATGGTGGATCTTACAAAGGATTTCTTCTTTAGTTATTCATACAACATAATGTGCAGTCTTCAAAAGAATTTGTGTGATTTTGTGTCGGGGGACATTATGTATGAAACAATGTTTGTGTGGAATGAGTACCTTACACGTGGTATTCGCTGTCACTTAAAAAGTACATTATGGACAGTTGCGTTGGTGCATGGATTTTTTAAACAGGTTAAATTATCAGTGTCAGAGAAAGATTTTATGTTTACATTGATTGCTAGGCGCTCACGTCATTATGCTGGCACAAGGTACTTAAAGCGTGGTGTCAATGAGAAAGGTAGGGTAGCAAATGAAGTTGAAACTGAGCAGATTGTGTTTAATATAAATACTAAAGCTGCTCCGGCACAAATAAGCTCTGTTGTACAAATTAGGGGATCCATTCCTCTTTTTTGGTCACAAGATAGTTCTTGGATAAATATGAAACCCGATATCGTCTTGCACAAAGACCAAAATTATGAAATAACAAGATGTCATTTCAATAATCTTGTCAAGAGATATGGAAATCCTATTATTATTTTCAACCTAATCAAGACATATGAAAGGAGGCCACGGGAGTTTATTCTCCGTTCAGAATTTGCAAAAGCCATTGATTTTATAAATAGAGATCTCCCTGCAGAAAATCATTTGAGATTCTTGCATTGGGATCTTAATGAACACTCTCAAAGAGCTACAAATATTCTCGAGTTATTGGTGAAATTTGGATCTGATGCCTTATGTTTGACAGGGTTATTTTATTGTCAACTGTTCTCTTCATTAAATATTTCAAGCGCCTCAAACTCATCTTTTCTTGTTTGTGGAAATGGAAGCAATCGATCAATCAATAATCATGAAAAAAATAGTGTTTTTCTCAAGGCTGGAGATCGGTGCCAAAAATATGATGATATCAGAGATACATCTGCAAACATTGTGGGCAAAACATGTATTGAAAGACCGCCTGCTTTTCAAAAGGGTGTCCTTCGTACAAATTGTATTGATTGCTTGGACCGAACAAATGTAGCCCAGTTTGCCTTTGGCTTGGCTTCCCTTTGTCAGCAGCTGTGTCTTTTGGGTTTTATTGATGTTCCAGCTATTGACTTGGATTCTCCATTATCTGATGATGTGATGGACTTGTATGAAAAAATGGGCGACACACTTGCTTTACAATATGGAGGTTCTGCTGCTCATAACAAGATATTTTGTGAAAGAAGAGGTCAATGGAAAGCAGCTACCCAGTCTCAAGAGTTTTTTAGAACTGTTCAGAGATACTACAGCAATACGTACGTCGATCCACTTAAACAGGATGCCATAAATGTGTTCTTAGGTTACTTCCAACCGCAAAAGGACAAAGCTGCACTATGGGAACTCGACTCTGATCAGCATTGCAATATCGGGAGGCATGACCCTCCATTAGTTGATGAAAAAGTCAGGTCCTTAAAAAGATCCCTGTCAGAAGGAAATATGCTATGTGACTGCACCACTGATTCTAGTTCTAATGCAATAGATGAAAAGTCTAAAAAATTTTATTCACCGCCAGATGCCAATGGTTTCTTGGGGTTTTCTGCTGAAATCTCTAAGTGTGAAAAAGGTGCATCATATTCTAGGCAGCTGTTTATGGATATTGAACATGGCGACTTTGATCAACATAGGTTTGACGAGTCAAGTTGTTCTAATTTTCTTGACCTTGATCGCATTTCATCTTCAGGGAATTCATGTATAGAGGAAATCCATGAAAGGTCATCAAGTGACAGTGCCATTACTGAAACCTCCACTGAAACGGCTTCAAAATTTTCTTCGGATGGTTCTAGCGACATGGTTGGAAATGGTGGAGAATATAAGCCGACGACTGCTGGCCTGCAAAATTCTGATGTTGGTGAATTTTCTGAGAGATTTATGCGCTGGGTTGACCATGGAGGACCTTTATGCTATTGATCTAAATCTCTGATTATACCTTTAATATGCTGGCCAGAAATATAAATGCACAGACAGTATATCTGAAGATATTGACTTCTTAACCTTGACTGTTTGTACGTTTGGATAAAATTTATGAATCTATAATGGACAAAAGGTATGTATATATATCAGCTGATCAAGAAGCAAAGGAGAAATTTCAGGGTGTTCCAATATGTACATTGTGTCAATGTCTTTGTCTGTAAAGTCGATTCTTTCAGTAGCTAGATGTCTATTATATACTTTCCATTCTAATATGTATATGTATATATTATATATATATATATA

Network for GWHGAAEX002424

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02383.17	Syja_N	98	393	2.10E-72

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K22913	FIG4	Metabolic pathways	map01100
K22913	FIG4	Inositol phosphate metabolism	map00562

Gene Ontology

GO term	Ontology	Name
GO:0042578	Molecular Function	phosphoric ester hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	49.860
SRP064423	SRR2545915	Juvenile tuber	29.220
SRP108465	SRR5643513	five period of Gastrodia elata	16.340
	SRR5643514	five period of Gastrodia elata	16.310
	SRR5643515	five period of Gastrodia elata	18.810
	SRR5643524	five period of Gastrodia elata	16.390
	SRR5643525	five period of Gastrodia elata	22.980
	SRR5643528	five period of Gastrodia elata	21.350
	SRR5643658	five period of Gastrodia elata	27.110
	SRR5643659	five period of Gastrodia elata	14.550
	SRR5643660	five period of Gastrodia elata	16.500
	SRR5643661	five period of Gastrodia elata	12.780
	SRR5643662	five period of Gastrodia elata	15.970
	SRR5643663	five period of Gastrodia elata	15.150
	SRR5643664	five period of Gastrodia elata	18.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	20.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.880
SRP279888	Gastro	Gastrodia elata tuber	20.38
	Juven	Juvenile tuber	20.92
	Mother_Gastro	Mother tuber of Gastrodia elata	21.64
	Mother_Juven	Mother tuber of Juvenile	31.48