Detail information of GWHGAAEX002427/evm.TU.scaffold_12.204


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37522465|ref|NP_925842.1|6.00E-27co-chaperonin GroES [Gloeobacter violaceus PCC 7421]
KOGKOG16411.00E-91Mitochondrial chaperonin
nrgi|743822835|ref|XP_010932378.1|4.63E-107PREDICTED: 20 kDa chaperonin, chloroplastic-like [Elaeis guineensis]
Swissprottr|O65282|CH10C_ARATH3.00E-9220 kDa chaperonin, chloroplastic (Precursor)
trEMBLtr|M0RQQ7|M0RQQ7_MUSAM5.00E-104Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P09270_001}
TAIRAT5G207201.00E-91chaperonin 20

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000985594598601354-
Transcript Sequence

Network for GWHGAAEX002427

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00166.20Cpn10611506.20E-28
PF00166.20Cpn101592501.10E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.180
SRR2545915Juvenile tuber57.890
SRP108465SRR5643513five period of Gastrodia elata71.690
SRR5643514five period of Gastrodia elata73.030
SRR5643515five period of Gastrodia elata74.950
SRR5643524five period of Gastrodia elata62.410
SRR5643525five period of Gastrodia elata16.850
SRR5643528five period of Gastrodia elata8.680
SRR5643658five period of Gastrodia elata8.650
SRR5643659five period of Gastrodia elata74.550
SRR5643660five period of Gastrodia elata79.430
SRR5643661five period of Gastrodia elata74.840
SRR5643662five period of Gastrodia elata86.710
SRR5643663five period of Gastrodia elata87.980
SRR5643664five period of Gastrodia elata86.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.140
SRR6049655Rhizomagastrodiae_C368-T10_good_147.750
SRR6049656Rhizomagastrodiae_C368-T07_good_162.980
SRR6049657Rhizomagastrodiae_C368-T07_good_165.470
SRR6049658Rhizomagastrodiae_C368-T04_good_149.200
SRR6049659Rhizomagastrodiae_C368-T04_good_135.120
SRR6049660Rhizomagastrodiae_C368-T01_good_161.370
SRR6049661Rhizomagastrodiae_C368-T04_good_160.090
SRR6049662Rhizomagastrodiae_C368-T01_good_186.570
SRR6049663Rhizomagastrodiae_C368-T01_good_166.100
SRR6049664Rhizomagastrodiae_C368-T10_good_164.380
SRR6049665Rhizomagastrodiae_C368-T10_good_164.380
SRP279888GastroGastrodia elata tuber 106.80
JuvenJuvenile tuber104.30
Mother_GastroMother tuber of Gastrodia elata 22.11
Mother_JuvenMother tuber of Juvenile 37.74