Gene detail

Detail information of GWHGAAEX002431/evm.TU.scaffold_12.210

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2344	0	Exocyst component protein and related proteins
nr	gi\|743774195\|ref\|XP_010917447.1\|	0	PREDICTED: exocyst complex component EXO70A1 [Elaeis guineensis]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	7.00E-109	Exocyst complex component EXO70B1
trEMBL	tr\|M0REN0\|M0REN0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P02030_001}
TAIR	AT1G72470	0	exocyst subunit exo70 family protein D1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000009	8814966	8817763	+

Transcript Sequence
>GWHTAAEX002431 CAGCTTTCGATATCCCAATGGACGGATACGATGGCGTCGCAGCAAATTGGAGACAATTCAATGCCGTCGCCCGCAAGCGCCGTCGGCCGTAGGCGGTCAAACGTCGTCGCGCGCATACAAAAGGACCAACGAAAAGCCCAAAAAGAAGGCCTATCCTCCAAAGGCTCTCTCTGATCGCCAAGCCCTCTTCGTCCTCCTCTTCCCCGATGCACGGCTCTGAGAGCTCCGGCGATGCTCCTCCGGCGACGGATCTCGAGGCGGCCGAAGAGCTCATCCTACGCTGGGACCCCTCCGCTTCGCTTCCTTCTGACCGTATGATGTTCGACTCCGGCGATCGCAGTGAGGCAGAGCGATTTCTGCGCGCCGTCGATGAGATCCGCCATGCCGTGACCAGCTCTGCGTCACTTCCCAGCACGATCCAGATCGCCATGGTACGGCTCGAGGACGAGTTCCGTCATCTGCTCATCACCCGCTCGAACCCCATCGAGATCGATTCGATCGTCGATCTGAACTCCATCTCCCTTCCTCGATCTAGGTCTGGCGACATGGCGCCAGATCTGCCTGATCCCGACACAGACGAAGAGGGATTGAGCAGCACTCCGAGTTACCGCTCCACCAGCAGCATCCGCGAAATCGATCTCCTCCCCGACGACGCCGTTCAAGACCTCCGAAGCATCGCTGACCGAATGATCGCCGCCGGGTACGGCCGCGAGTGCTTTCAGGTCTACGCAAGCGCCCGCAAATCCGCCATGGACCTCTGTTTCCGCCTTCTCGGCATCGAGAGGCTCAGCATTGGCGACGTCCAGCGGCTGGAATGGGATGCCCTCGAATCGAAGATCCGGCGCTGGATCCGCGCTGCGAGGGCTTGCATCCGCATCATTTTCTCCAGCGAGCGTCGCCTCTGCGAGCTTATCTTCACCGGAGAAGACGCCCCCTTCGTCGAAACCGTGAAAGGCGCCGCTGTCCAACTCCTCAGCTTTGCGGAAGCCATCAGCATCGGGCGGCGCTCTCCCGAGAAACTCTTCAAGATCCTCGACCTGCACGATGCCCTCGCCGATCTCGTTCCCGACGTCGCCCTCATTTTCCAATCCAGGGCGTTGGAGTCGATCAACGCTCAGGTGTCCGACATCATCGCCAGGCTCTCGGAGGCTGTTCGAGGAATTTTGTCTGAGTTCGAGAACGCTGTTCTTAGAGAGCCCTCCAAGATTCCGGTTCCTGGAGGCACCATCCACCCTCTCACGAGGTATGTGATGAATTACATCAGCCTCATTTCGGACTACAAGCAAACGCTAGTTCAGCTTATTCAATCTAGGCCTCCGGCGACCCATCGGTTCCCGGGCGATGAATCCAGCACGGATTTGCCTCACCTGGACTTGCCGGAAAAAGAATCCCCTCTCGCTTCCCATCTGATTTGGATAATCTTCATCCTCCAGTTCAATGTCGAGAACAAGGCCCAGCTCTACAAGGACGCCGCCCTCTCCCACCTTTTCTTAATGAACAACCTTCATTACATCGTCCAGAAAGTAAAAGGCTCCCCGGAATTACAGGAAATGATCGGGGATGAGTACCTTAAGAAATTAACCGGAAAGTTTCGCCAACTGGCCACCAGCCATCAGAGAGCAACGTGGGTGAAAATCCTCTTTTGTTTGAGAGACGAAGGGCTGCATGTAGGAGGGGGCTTCTCTTCCTCGGTTTCAAAATCGACTCTGAGGGATAGATTCAAGTCTTTCAATGCCGCCTTCGATGAAGCCCATCGAACCCAAGCAGCATGGTTAGTCCCCGACCCCCAGCTGAGGGAGGAGCTGAGGATCTCCATCTCTGAGCTGCTGCTCCCTGCCTACAGATCCTTTCTGGGCCGCTTCAGGCATCATATAGAGAGCAGCCGCCACCCGGAGATGTATATCAAGTACACGGCGGAGGATCTCGAGCTAGCATTATCCGATTTCTTCGAAGGCTGCCCGCCGTCTTTGCACGGCAGGAGAAAGAGCCATTGAAGGGGATCACAGAGGTTTGTAGAAATCATTCTTTAAATCTTCTTCAAGGAAAAGCCTTGGAAGCCAACAGGATCCTCAGATATCCATGCTTTCCTTGATCGCAAGATTCTTCTGTTGAGAGCATGCGGGGATGGATGAAACTAAATCACTTATAAGAGCTCTCTGTAAATTTTCGTATGTAAGTTTGCCTGTTACAGCTTATCATATTTTGTTTAAGCAAGTGCGTAGTAACAATTGTTTATTGATTTTAAAAGTAGGATTTTTTGCTAAGTTTAAAAACAAAGGAGCAATCTTTACTACTTTGTTTCATCTATCTGATTAGTAGCTTTTAGAATAGTGAATACCAATCTCATATTCTAACCCAATTTTGTTTTCCTTTGATGAGAACACTTTGAATTTGGCCTTGCTAATAATCGCATGTGTCTGCATTGGTAGGAAGATATTATGAATGAGGTGTGTGTATAGCAAGGATTTGGGTGATAATTATGTAAAAATGTAATAGATATTTCTGTTGTTACAATAATTATCTGAATATGTTTTTTCTTAATAAGACTTGCAGATACTTGAAATGGTTTTGTAGCCCTCTTGCAAGAGCTCAAATTCTGTGTTGGCACTTTTACCTCTTAACGAGGTATTCTTTTGGAAAACAAAAGGAAGAGATGTTATATGCACAGCACCTCAAACTTGCATATTTACCAAATGAGCTTTTTGTTGAAATACATGTACTGGTCTATAAATAAAAGAAACCAATGTTCTCTTAGTACATGTTGCACAGTCAAGCTTAAGCTCGGTATCCTATCTGAA

Network for GWHGAAEX002431

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.14	Exo70	213	578	3.90E-118

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	Biological Process	exocytosis
GO:0000145	Cellular Component	exocyst

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.360
SRP064423	SRR2545915	Juvenile tuber	8.360
SRP108465	SRR5643513	five period of Gastrodia elata	13.540
	SRR5643514	five period of Gastrodia elata	11.430
	SRR5643515	five period of Gastrodia elata	21.220
	SRR5643524	five period of Gastrodia elata	12.840
	SRR5643525	five period of Gastrodia elata	18.470
	SRR5643528	five period of Gastrodia elata	26.080
	SRR5643658	five period of Gastrodia elata	14.760
	SRR5643659	five period of Gastrodia elata	18.740
	SRR5643660	five period of Gastrodia elata	12.100
	SRR5643661	five period of Gastrodia elata	14.710
	SRR5643662	five period of Gastrodia elata	22.130
	SRR5643663	five period of Gastrodia elata	16.780
	SRR5643664	five period of Gastrodia elata	32.810
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.850
SRP279888	Gastro	Gastrodia elata tuber	10.62
	Juven	Juvenile tuber	8.09
	Mother_Gastro	Mother tuber of Gastrodia elata	32.70
	Mother_Juven	Mother tuber of Juvenile	25.00