Detail information of GWHGAAEX002435/evm.TU.scaffold_12.214
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521464512|ref|YP_008151634.1| | 5.00E-24 | hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2] |
| KOG | KOG1187 | 2.00E-163 | Serine/threonine protein kinase |
| nr | gi|672107946|ref|XP_008782588.1| | 0 | PREDICTED: serine/threonine-protein kinase At5g01020-like [Phoenix dactylifera] |
| Swissprot | tr|Q8GXZ3|Y5102_ARATH | 3.00E-146 | Serine/threonine-protein kinase At5g01020 |
| trEMBL | tr|W1PTC1|W1PTC1_AMBTC | 4.00E-173 | Uncharacterized protein {ECO:0000313|EMBL:ERN11288.1} |
| TAIR | AT2G05940 | 2.00E-163 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000009 | 9003018 | 9011292 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002435
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 22 | 295 | 7.80E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 23.410 |
| SRR2545915 | Juvenile tuber | 39.680 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 79.900 |
| SRR5643514 | five period of Gastrodia elata | 80.200 | |
| SRR5643515 | five period of Gastrodia elata | 68.760 | |
| SRR5643524 | five period of Gastrodia elata | 105.120 | |
| SRR5643525 | five period of Gastrodia elata | 54.260 | |
| SRR5643528 | five period of Gastrodia elata | 18.810 | |
| SRR5643658 | five period of Gastrodia elata | 43.670 | |
| SRR5643659 | five period of Gastrodia elata | 16.690 | |
| SRR5643660 | five period of Gastrodia elata | 25.070 | |
| SRR5643661 | five period of Gastrodia elata | 25.440 | |
| SRR5643662 | five period of Gastrodia elata | 54.510 | |
| SRR5643663 | five period of Gastrodia elata | 33.070 | |
| SRR5643664 | five period of Gastrodia elata | 36.150 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 37.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.740 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 37.780 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 42.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 30.630 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 45.260 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.160 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.070 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 42.090 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 42.090 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 83.78 |
| Juven | Juvenile tuber | 56.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 101.24 | |
| Mother_Juven | Mother tuber of Juvenile | 86.21 |