Detail information of GWHGAAEX002448/evm.TU.scaffold_12.230


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672183310|ref|XP_008811927.1|8.09E-31PREDICTED: protein TIFY 5A-like [Phoenix dactylifera]
Swissprottr|Q8LBM2|TIF5A_ARATH5.00E-15Protein TIFY 5A
trEMBLtr|A0A059C5R7|A0A059C5R7_EUCGR2.00E-22Uncharacterized protein {ECO:0000313|EMBL:KCW73813.1}
TAIRAT2G346008.00E-11jasmonate-zim-domain protein 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000994247999425980+
Transcript Sequence

Network for GWHGAAEX002448

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify38666.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.630
SRR2545915Juvenile tuber7.320
SRP108465SRR5643513five period of Gastrodia elata49.250
SRR5643514five period of Gastrodia elata10.350
SRR5643515five period of Gastrodia elata147.110
SRR5643524five period of Gastrodia elata28.960
SRR5643525five period of Gastrodia elata1.410
SRR5643528five period of Gastrodia elata56.670
SRR5643658five period of Gastrodia elata24.510
SRR5643659five period of Gastrodia elata17.500
SRR5643660five period of Gastrodia elata7.670
SRR5643661five period of Gastrodia elata8.260
SRR5643662five period of Gastrodia elata42.930
SRR5643663five period of Gastrodia elata10.020
SRR5643664five period of Gastrodia elata8.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.030
SRR6049655Rhizomagastrodiae_C368-T10_good_15.830
SRR6049656Rhizomagastrodiae_C368-T07_good_13.140
SRR6049657Rhizomagastrodiae_C368-T07_good_13.580
SRR6049658Rhizomagastrodiae_C368-T04_good_11.860
SRR6049659Rhizomagastrodiae_C368-T04_good_11.090
SRR6049660Rhizomagastrodiae_C368-T01_good_14.410
SRR6049661Rhizomagastrodiae_C368-T04_good_11.690
SRR6049662Rhizomagastrodiae_C368-T01_good_15.100
SRR6049663Rhizomagastrodiae_C368-T01_good_10.750
SRR6049664Rhizomagastrodiae_C368-T10_good_13.310
SRR6049665Rhizomagastrodiae_C368-T10_good_13.310
SRP279888GastroGastrodia elata tuber 2.68
JuvenJuvenile tuber6.56
Mother_GastroMother tuber of Gastrodia elata 5.85
Mother_JuvenMother tuber of Juvenile 7.39