Detail information of GWHGAAEX002451/evm.TU.scaffold_12.233


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521465867|ref|YP_008153123.1|2.00E-89hypothetical protein SCE1572_33750 [Sorangium cellulosum So0157-2]
KOGKOG32908.00E-93Peroxisomal phytanoyl-CoA hydroxylase
nrgi|695031453|ref|XP_009403242.1|3.11E-167PREDICTED: phytanoyl-CoA dioxygenase 1 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q10E49|PAHX1_ORYSJ1.00E-149Phytanoyl-CoA dioxygenase 1
trEMBLtr|M0T3S9|M0T3S9_MUSAM1.00E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P03310_001}
TAIRAT2G014908.00E-93phytanoyl-CoA dioxygenase (PhyH) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000994494899466551+
Transcript Sequence

Network for GWHGAAEX002451

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05721.12PhyH472841.10E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00477PHYH Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.440
SRR2545915Juvenile tuber47.620
SRP108465SRR5643513five period of Gastrodia elata44.410
SRR5643514five period of Gastrodia elata48.780
SRR5643515five period of Gastrodia elata39.110
SRR5643524five period of Gastrodia elata42.720
SRR5643525five period of Gastrodia elata64.820
SRR5643528five period of Gastrodia elata48.650
SRR5643658five period of Gastrodia elata64.410
SRR5643659five period of Gastrodia elata37.500
SRR5643660five period of Gastrodia elata37.510
SRR5643661five period of Gastrodia elata34.910
SRR5643662five period of Gastrodia elata39.670
SRR5643663five period of Gastrodia elata40.970
SRR5643664five period of Gastrodia elata41.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.390
SRR6049655Rhizomagastrodiae_C368-T10_good_140.420
SRR6049656Rhizomagastrodiae_C368-T07_good_137.850
SRR6049657Rhizomagastrodiae_C368-T07_good_142.360
SRR6049658Rhizomagastrodiae_C368-T04_good_146.500
SRR6049659Rhizomagastrodiae_C368-T04_good_152.830
SRR6049660Rhizomagastrodiae_C368-T01_good_137.260
SRR6049661Rhizomagastrodiae_C368-T04_good_138.280
SRR6049662Rhizomagastrodiae_C368-T01_good_133.520
SRR6049663Rhizomagastrodiae_C368-T01_good_135.800
SRR6049664Rhizomagastrodiae_C368-T10_good_148.370
SRR6049665Rhizomagastrodiae_C368-T10_good_148.370
SRP279888GastroGastrodia elata tuber 49.78
JuvenJuvenile tuber46.83
Mother_GastroMother tuber of Gastrodia elata 63.43
Mother_JuvenMother tuber of Juvenile 56.49