Detail information of GWHGAAEX002453/evm.TU.scaffold_12.235
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325109797|ref|YP_004270865.1| | 3.00E-24 | serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305] |
| KOG | KOG1187 | 9.00E-151 | Serine/threonine protein kinase |
| nr | gi|672179305|ref|XP_008809819.1| | 0 | PREDICTED: serine/threonine-protein kinase PBS1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9FFW5|PERK8_ARATH | 2.00E-65 | Proline-rich receptor-like protein kinase PERK8 |
| trEMBL | tr|M0SA94|M0SA94_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22530_001} |
| TAIR | AT5G37790 | 9.00E-151 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000009 | 9486986 | 9504425 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002453
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 153 | 426 | 7.60E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VI |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.580 |
| SRR2545915 | Juvenile tuber | 4.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.920 |
| SRR5643514 | five period of Gastrodia elata | 15.310 | |
| SRR5643515 | five period of Gastrodia elata | 12.460 | |
| SRR5643524 | five period of Gastrodia elata | 13.990 | |
| SRR5643525 | five period of Gastrodia elata | 9.650 | |
| SRR5643528 | five period of Gastrodia elata | 15.450 | |
| SRR5643658 | five period of Gastrodia elata | 9.230 | |
| SRR5643659 | five period of Gastrodia elata | 7.460 | |
| SRR5643660 | five period of Gastrodia elata | 5.920 | |
| SRR5643661 | five period of Gastrodia elata | 6.570 | |
| SRR5643662 | five period of Gastrodia elata | 6.370 | |
| SRR5643663 | five period of Gastrodia elata | 7.740 | |
| SRR5643664 | five period of Gastrodia elata | 4.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.120 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.900 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.780 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.070 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.420 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.840 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.270 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.82 |
| Juven | Juvenile tuber | 14.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.41 | |
| Mother_Juven | Mother tuber of Juvenile | 7.84 |