Gene detail

Detail information of GWHGAAEX002457/evm.TU.scaffold_12.241

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|514814488\|ref\|XP_004982015.1\|	2.79E-74	PREDICTED: microsomal glutathione S-transferase 3-like [Setaria italica]
trEMBL	tr\|K4AGA5\|K4AGA5_SETIT	1.00E-74	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si037912m}
TAIR	AT1G65820	1.00E-68	microsomal glutathione s-transferase, putative

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000009	9594695	9597742	-

Transcript Sequence
>GWHTAAEX002457 CCCTATTTAAGTGCAAAACCGATAAGCTAAACGAACCTCCAAGTGGATAACTACGAAGACCATTCGATCGAGAGAGAAAGAGTGAGAGATAGAGAGAGGCATGGCGGTGGCGAACGATATCCCGAAGGAGTTCGGATACGTTGTCCTGGTGATAGTTCTTTACACTTTGTTGAATTTGTGGATGGGCACTCAAGTGGGAAAAGCCCGTAAAAGGTTCAAAGTACCTTACCCCGCGCTCTATGCGGTGGAATCTGAGAACAAGGATGCCAAATTCTTTAATTGCATCCAGAGAGGACACCAGAATTCGATTGAGTACATGCCAGTGTTCTTCGTGATGCTTTCGATCGGTGGAATCCAGCACCCGGTTATTGCATCTGGGCTTGGACTCTTCTACTCCATCACCCGATTCTTCTACTTCAAGGGATACGCTACTGGAGTTCCCGAGAATCGGCTCAAGATAGGAGGCTTGAACTTTCTAGCGTTGCTTGGGCTCCTTTTTTGCACCGCCTCTTTTGGTATCTGCCTACTTCGTCGTTAGGTTCTCCAAGTGTATGACGTTTTTCCCAGCCTGCCATCGTTTATTTGTTAGCTGCCTCGATAGTATAATTTCGCTTGGAATAATGTTAGCTAGCTGTTTGCTTTTGCGTGGCAGTAGTAATCATGTTTTGTTGCTTCTGTTTGGAACTTGTCATTGTCAGGCTGGATTAGGCTTTTTGAATAAGATGGCTATATTTTTCGAAATGGGGATAAATGTATGAGAATCGATCTTTACTGATCTATTTTAGTGCTTATCAAACATTTTATCTTCTATAATTTGCTTTTATTCTCATTGAACCCAAGCAGTGATCGTGTGGTATTTATGCAGCAACTTTTTTGTTTTCCGAGATATCTACTTGCCAAAGATGAGCTTTATTCTAATTGTGTTCTTCAAAGTTCATCATTTTGTTAGTCTTGTCACATGTGTTAATGGTTTGAATGCATATAACTGGGAGGTGTGAACTTGTTGTTTTGGAAAGTGATTAAACGAGTGCTAATCTTAAGCCTGATAAGCGTGTTAAGTAGCTAAGCTATTTGGTCGCTAAGAGAAGTTAGTTGCTTTCGTAAGCTTGAATTTTACTCAGTTCACATTTTGACTATAACTATTTTTGGTAATTATTATAGTACTTAATATTTATTTTTTATTATCATACACGTAGATGGCTGCTCCTCCAGTAGATGAAATGGGGTAGCACCTTGCCTTTCGGAGGATCCTTTTTGTTACCAATGCCAAACAAGGCAATGGCCAAGTATAAGGCTTTCTGTTCTTTATTCAATATATACTATAAGCCTGCTTTTGAACCCTATCTACCTGTTATTAATTTCTGACTAATTGCATTTGTATTATATAATCATTAATATTTATATTGATTATTAACCCGCCAAGTATTAAGTAATAATTATTTATAATTAATATTATTTATTTTAAATTCATATACTTTATGTTACAATGCATATATATTAACATTATATATGTGTTGTGTATGTATTTGTGTATATATATATATTTATATACACTAATGTTATATACCCTAGCTACTTCACATGATGGTGAAATAATATTTTATTTTATGTGCTGCTTGTTGGCTTGAATCTCAAGCTAAGTGTGGCAGCAATCACAGCCCATATACTGTACGTTTGCCACCAGCTAAATTTGGCCAGTGTTCCCTCTTCTTCACTTGATTGCTCTTTAGAGCTGTGAAATGTTCTATTTTGAATATAGAAGGCTAAAAATAAGCGGCAGTGGATATATGGGGATACAGTTCAACAGAGAAGCATATCAAGTAAAACAGCAGCAGAAGGCAAAGACGAGAAAAGCCAGCAGAGCAAAAGACAGGAAAAAGGAATAATTTTGCAAACACGGAGGAAAACCAATTTCCTTTAAAAAACTTCTGATCTAGTATAATAAATGTATAACCAGTGCAGAGTTAAATCCATAGCCCAAAATGTAAACACAGCAAACCATGTCCAGGCACTGCAGCTAAATGTAGTACTCGTGGAATTGGGTTTACAAGTTTTAGCAGCCCTCTGCAAAGTTTGCATGCATCTACAAACAATATGGCCTCTGAAAATTCTTGAGAAGAAGAATAACATATTTTCCCAATAGGAGAAATAGGAAAAAAACAGCAAAGTAGAAGAGGATAGTTGCAGAGCTCTCGAACTAAAGAAAAGAAAGCTAAAGAAGAATGCTTACTCTTTGGAAAAAAAAAACTGAACCAGAGCTAAAGAAAGCAATGGCAGTGGATATGAGTGCTTTTTTGTAATTTTTGTTTTGCCGGGTGCTTTATAAGAAATATTAGAATTTTAGAATTTATTTTAAGCGCTTTGCATGTAAAAATCCCAAGTTAATGTGTTTTATCATATTTATGCTCTTATGAAAAGAATTTGTGCAACTTTTATTTGCTATTCTCTTTTGTGATTTTGCCCATGCATTGTTTGCATTCTTATTATTATGTTATGATGTGGAGACCAACTAGATCATCAAAGGAGATGCAAATGGATTCTCATGGGTTCCAGGGTGAGGTTACACCAACAAATAGCAAATCTGGTGAAATAATGTAAAAACTCACTTAAATAGTGTTAAGTAATACTCTCAATTATCGAGGCGTCTTTTTAATGGTGGAGTTCCTGATAAGAATTTTAAATTTTAATGAGGTGGAAGCACTCTTAAGAGGGGTGACCTATTAAAAAATTATCTCCTGAGGACAAAGACATGAGGCCTTTCAGGTTAAAATAGACAAGAGTATTGTTACATGACTCTCA

Network for GWHGAAEX002457

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01124.17	MAPEG	15	135	5.50E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00799	GST, gst	Metabolic pathways	map01100
		Glutathione metabolism	map00480
		Metabolism of xenobiotics by cytochrome P450	map00980
		Drug metabolism - cytochrome P450	map00982
		Drug metabolism - other enzymes	map00983
		Longevity regulating pathway - worm	map04212

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	289.970
SRP064423	SRR2545915	Juvenile tuber	250.780
SRP108465	SRR5643513	five period of Gastrodia elata	164.070
	SRR5643514	five period of Gastrodia elata	132.110
	SRR5643515	five period of Gastrodia elata	172.280
	SRR5643524	five period of Gastrodia elata	172.080
	SRR5643525	five period of Gastrodia elata	115.290
	SRR5643528	five period of Gastrodia elata	107.190
	SRR5643658	five period of Gastrodia elata	69.690
	SRR5643659	five period of Gastrodia elata	205.590
	SRR5643660	five period of Gastrodia elata	227.190
	SRR5643661	five period of Gastrodia elata	203.150
	SRR5643662	five period of Gastrodia elata	149.980
	SRR5643663	five period of Gastrodia elata	123.300
	SRR5643664	five period of Gastrodia elata	139.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	149.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	236.910
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	170.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	156.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	180.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	208.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	160.390
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	164.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	102.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	120.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	168.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	168.320
SRP279888	Gastro	Gastrodia elata tuber	176.25
	Juven	Juvenile tuber	141.72
	Mother_Gastro	Mother tuber of Gastrodia elata	242.37
	Mother_Juven	Mother tuber of Juvenile	241.21