Detail information of GWHGAAEX002466/evm.TU.scaffold_12.251


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46031.00E-108TBP-1 interacting protein
nrgi|743800828|ref|XP_010926143.1|4.75E-126PREDICTED: homologous-pairing protein 2 homolog [Elaeis guineensis]
Swissprottr|Q9FX64|HOP2_ARATH3.00E-109Homologous-pairing protein 2 homolog
trEMBLtr|M0RHA4|M0RHA4_MUSAM3.00E-119Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P11280_001}
TAIRAT1G133301.00E-108Arabidopsis Hop2 homolog

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000997188589727455-
Transcript Sequence

Network for GWHGAAEX002466

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07106.12TBPIP81761.20E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.020
SRR2545915Juvenile tuber26.940
SRP108465SRR5643513five period of Gastrodia elata20.720
SRR5643514five period of Gastrodia elata21.970
SRR5643515five period of Gastrodia elata17.260
SRR5643524five period of Gastrodia elata17.980
SRR5643525five period of Gastrodia elata13.880
SRR5643528five period of Gastrodia elata9.760
SRR5643658five period of Gastrodia elata10.500
SRR5643659five period of Gastrodia elata26.130
SRR5643660five period of Gastrodia elata24.000
SRR5643661five period of Gastrodia elata24.720
SRR5643662five period of Gastrodia elata21.630
SRR5643663five period of Gastrodia elata24.700
SRR5643664five period of Gastrodia elata18.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.900
SRR6049655Rhizomagastrodiae_C368-T10_good_111.120
SRR6049656Rhizomagastrodiae_C368-T07_good_118.120
SRR6049657Rhizomagastrodiae_C368-T07_good_114.510
SRR6049658Rhizomagastrodiae_C368-T04_good_113.580
SRR6049659Rhizomagastrodiae_C368-T04_good_112.630
SRR6049660Rhizomagastrodiae_C368-T01_good_117.250
SRR6049661Rhizomagastrodiae_C368-T04_good_113.200
SRR6049662Rhizomagastrodiae_C368-T01_good_117.970
SRR6049663Rhizomagastrodiae_C368-T01_good_118.720
SRR6049664Rhizomagastrodiae_C368-T10_good_120.030
SRR6049665Rhizomagastrodiae_C368-T10_good_120.030
SRP279888GastroGastrodia elata tuber 27.65
JuvenJuvenile tuber31.97
Mother_GastroMother tuber of Gastrodia elata 10.27
Mother_JuvenMother tuber of Juvenile 14.58