Detail information of GWHGAAEX002469/evm.TU.scaffold_12.254


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08963.00E-86Ubiquitin-conjugating enzyme E2
nrgi|743800777|ref|XP_010926115.1|3.57E-97PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like [Elaeis guineensis]
Swissprottr|Q9CAB6|UEV1B_ARATH9.00E-87Ubiquitin-conjugating enzyme E2 variant 1B
trEMBLtr|B3TM02|B3TM02_ELAGV6.00E-97Ubiquitin-conjugating enzyme 2 {ECO:0000313|EMBL:ACF06583.1}
TAIRAT1G706603.00E-86MMS ZWEI homologue 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000998049929820934-
Transcript Sequence

Network for GWHGAAEX002469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con421361.80E-15
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10704UBE2V Toll and Imd signaling pathway map04624

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms404.540
SRR2545915Juvenile tuber224.320
SRP108465SRR5643513five period of Gastrodia elata81.600
SRR5643514five period of Gastrodia elata86.890
SRR5643515five period of Gastrodia elata76.670
SRR5643524five period of Gastrodia elata85.190
SRR5643525five period of Gastrodia elata164.210
SRR5643528five period of Gastrodia elata116.650
SRR5643658five period of Gastrodia elata149.030
SRR5643659five period of Gastrodia elata80.550
SRR5643660five period of Gastrodia elata113.710
SRR5643661five period of Gastrodia elata97.050
SRR5643662five period of Gastrodia elata78.460
SRR5643663five period of Gastrodia elata70.440
SRR5643664five period of Gastrodia elata91.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.700
SRR6049655Rhizomagastrodiae_C368-T10_good_176.650
SRR6049656Rhizomagastrodiae_C368-T07_good_166.440
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.670
SRR6049658Rhizomagastrodiae_C368-T04_good_167.170
SRR6049659Rhizomagastrodiae_C368-T04_good_150.140
SRR6049660Rhizomagastrodiae_C368-T01_good_199.030
SRR6049661Rhizomagastrodiae_C368-T04_good_145.080
SRR6049662Rhizomagastrodiae_C368-T01_good_172.140
SRR6049663Rhizomagastrodiae_C368-T01_good_183.260
SRR6049664Rhizomagastrodiae_C368-T10_good_168.240
SRR6049665Rhizomagastrodiae_C368-T10_good_168.240
SRP279888GastroGastrodia elata tuber 80.66
JuvenJuvenile tuber82.24
Mother_GastroMother tuber of Gastrodia elata 125.30
Mother_JuvenMother tuber of Juvenile 79.07