Detail information of GWHGAAEX002471/evm.TU.scaffold_12.256


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743785801|ref|XP_010922006.1|1.24E-130PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Elaeis guineensis]
Swissprottr|Q9LV26|FBL45_ARATH3.00E-14Putative F-box/LRR-repeat protein At3g18150
trEMBLtr|M0RVH7|M0RVH7_MUSAM4.00E-123Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P25970_001}
TAIRAT1G787603.00E-13F-box/RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000998529269855064+
Transcript Sequence

Network for GWHGAAEX002471

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.250
SRR2545915Juvenile tuber13.040
SRP108465SRR5643513five period of Gastrodia elata19.120
SRR5643514five period of Gastrodia elata14.830
SRR5643515five period of Gastrodia elata16.860
SRR5643524five period of Gastrodia elata17.440
SRR5643525five period of Gastrodia elata25.090
SRR5643528five period of Gastrodia elata25.210
SRR5643658five period of Gastrodia elata25.990
SRR5643659five period of Gastrodia elata17.490
SRR5643660five period of Gastrodia elata13.780
SRR5643661five period of Gastrodia elata18.400
SRR5643662five period of Gastrodia elata20.190
SRR5643663five period of Gastrodia elata17.840
SRR5643664five period of Gastrodia elata18.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.430
SRR6049655Rhizomagastrodiae_C368-T10_good_121.570
SRR6049656Rhizomagastrodiae_C368-T07_good_122.160
SRR6049657Rhizomagastrodiae_C368-T07_good_120.030
SRR6049658Rhizomagastrodiae_C368-T04_good_122.810
SRR6049659Rhizomagastrodiae_C368-T04_good_121.980
SRR6049660Rhizomagastrodiae_C368-T01_good_126.800
SRR6049661Rhizomagastrodiae_C368-T04_good_121.670
SRR6049662Rhizomagastrodiae_C368-T01_good_119.540
SRR6049663Rhizomagastrodiae_C368-T01_good_123.590
SRR6049664Rhizomagastrodiae_C368-T10_good_121.580
SRR6049665Rhizomagastrodiae_C368-T10_good_121.580
SRP279888GastroGastrodia elata tuber 15.48
JuvenJuvenile tuber19.02
Mother_GastroMother tuber of Gastrodia elata 28.79
Mother_JuvenMother tuber of Juvenile 31.89