Detail information of GWHGAAEX002478/evm.TU.scaffold_12.263


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479149505|ref|YP_007779934.1|1.00E-25Serine/threonine protein kinase [Roseburia intestinalis XB6B4]
KOGKOG11870Serine/threonine protein kinase
nrgi|743820758|ref|XP_010931864.1|0PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 isoform X2 [Elaeis guineensis]
Swissprottr|Q9LFV3|Y5157_ARATH9.00E-109Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBLtr|E0CT36|E0CT36_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20485.3}
TAIRAT5G545900Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000091005198810073316+
Transcript Sequence

Network for GWHGAAEX002478

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr1143746.10E-50
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-I-2

KEGG pathway

KO Enzyme pathway mapID
K04733IRAK4 MAPK signaling pathway map04010
NF-kappa B signaling pathwaymap04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.600
SRR2545915Juvenile tuber7.860
SRP108465SRR5643513five period of Gastrodia elata7.830
SRR5643514five period of Gastrodia elata9.780
SRR5643515five period of Gastrodia elata9.930
SRR5643524five period of Gastrodia elata9.420
SRR5643525five period of Gastrodia elata9.290
SRR5643528five period of Gastrodia elata9.030
SRR5643658five period of Gastrodia elata10.560
SRR5643659five period of Gastrodia elata11.660
SRR5643660five period of Gastrodia elata12.380
SRR5643661five period of Gastrodia elata12.790
SRR5643662five period of Gastrodia elata11.310
SRR5643663five period of Gastrodia elata12.350
SRR5643664five period of Gastrodia elata9.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.480
SRR6049655Rhizomagastrodiae_C368-T10_good_16.460
SRR6049656Rhizomagastrodiae_C368-T07_good_19.340
SRR6049657Rhizomagastrodiae_C368-T07_good_17.280
SRR6049658Rhizomagastrodiae_C368-T04_good_18.290
SRR6049659Rhizomagastrodiae_C368-T04_good_16.350
SRR6049660Rhizomagastrodiae_C368-T01_good_17.590
SRR6049661Rhizomagastrodiae_C368-T04_good_18.380
SRR6049662Rhizomagastrodiae_C368-T01_good_111.220
SRR6049663Rhizomagastrodiae_C368-T01_good_110.070
SRR6049664Rhizomagastrodiae_C368-T10_good_110.010
SRR6049665Rhizomagastrodiae_C368-T10_good_110.010
SRP279888GastroGastrodia elata tuber 16.06
JuvenJuvenile tuber17.22
Mother_GastroMother tuber of Gastrodia elata 24.87
Mother_JuvenMother tuber of Juvenile 22.74