Detail information of GWHGAAEX002488/evm.TU.scaffold_12.275


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|325295287|ref|YP_004281801.1|2.00E-49UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase [Desulfurobacterium thermolithotrophum DSM 11699]
nrgi|672163037|ref|XP_008801351.1|1.59E-98PREDICTED: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X2 [Phoenix dactylifera]
Swissprottr|F4JIP6|LPXD2_ARATH3.00E-86Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial (Precursor)
trEMBLtr|M0RGX8|M0RGX8_MUSAM2.00E-96Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P10020_001}
TAIRAT4G052104.00E-78Trimeric LpxA-like enzymes superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000091035138710390715-
Transcript Sequence

Network for GWHGAAEX002488

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00132.23Hexapep1131483.30E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009245Biological Processlipid A biosynthetic process
GO:0016410Molecular FunctionN-acyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.710
SRR2545915Juvenile tuber37.450
SRP108465SRR5643513five period of Gastrodia elata15.530
SRR5643514five period of Gastrodia elata15.430
SRR5643515five period of Gastrodia elata12.200
SRR5643524five period of Gastrodia elata16.170
SRR5643525five period of Gastrodia elata12.920
SRR5643528five period of Gastrodia elata7.170
SRR5643658five period of Gastrodia elata16.860
SRR5643659five period of Gastrodia elata15.580
SRR5643660five period of Gastrodia elata17.280
SRR5643661five period of Gastrodia elata13.000
SRR5643662five period of Gastrodia elata13.870
SRR5643663five period of Gastrodia elata11.100
SRR5643664five period of Gastrodia elata14.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.970
SRR6049655Rhizomagastrodiae_C368-T10_good_112.900
SRR6049656Rhizomagastrodiae_C368-T07_good_119.710
SRR6049657Rhizomagastrodiae_C368-T07_good_124.670
SRR6049658Rhizomagastrodiae_C368-T04_good_125.780
SRR6049659Rhizomagastrodiae_C368-T04_good_125.740
SRR6049660Rhizomagastrodiae_C368-T01_good_124.640
SRR6049661Rhizomagastrodiae_C368-T04_good_121.910
SRR6049662Rhizomagastrodiae_C368-T01_good_115.490
SRR6049663Rhizomagastrodiae_C368-T01_good_117.390
SRR6049664Rhizomagastrodiae_C368-T10_good_113.360
SRR6049665Rhizomagastrodiae_C368-T10_good_113.360
SRP279888GastroGastrodia elata tuber 15.95
JuvenJuvenile tuber10.63
Mother_GastroMother tuber of Gastrodia elata 2.11
Mother_JuvenMother tuber of Juvenile 4.17