Detail information of GWHGAAEX002500/evm.TU.scaffold_120.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743788810|ref|XP_010922758.1|1.70E-40PREDICTED: probable WRKY transcription factor 70 [Elaeis guineensis]
Swissprottr|Q9SHB5|WRK55_ARATH4.00E-15WRKY transcription factor 55
trEMBLtr|C5YRJ7|C5YRJ7_SORBI3.00E-29Putative uncharacterized protein Sb08g002560 {ECO:0000313|EMBL:EES15641.1}
TAIRAT2G40740_21.00E-14Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000118525634528404-
Transcript Sequence

Network for GWHGAAEX002500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1492105.60E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms91.420
SRR2545915Juvenile tuber39.390
SRP108465SRR5643513five period of Gastrodia elata38.830
SRR5643514five period of Gastrodia elata65.510
SRR5643515five period of Gastrodia elata38.940
SRR5643524five period of Gastrodia elata59.500
SRR5643525five period of Gastrodia elata21.300
SRR5643528five period of Gastrodia elata22.310
SRR5643658five period of Gastrodia elata17.860
SRR5643659five period of Gastrodia elata22.060
SRR5643660five period of Gastrodia elata23.100
SRR5643661five period of Gastrodia elata19.710
SRR5643662five period of Gastrodia elata18.870
SRR5643663five period of Gastrodia elata20.640
SRR5643664five period of Gastrodia elata15.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.070
SRR6049655Rhizomagastrodiae_C368-T10_good_122.350
SRR6049656Rhizomagastrodiae_C368-T07_good_127.110
SRR6049657Rhizomagastrodiae_C368-T07_good_135.540
SRR6049658Rhizomagastrodiae_C368-T04_good_137.090
SRR6049659Rhizomagastrodiae_C368-T04_good_157.010
SRR6049660Rhizomagastrodiae_C368-T01_good_148.990
SRR6049661Rhizomagastrodiae_C368-T04_good_134.920
SRR6049662Rhizomagastrodiae_C368-T01_good_128.320
SRR6049663Rhizomagastrodiae_C368-T01_good_155.850
SRR6049664Rhizomagastrodiae_C368-T10_good_115.390
SRR6049665Rhizomagastrodiae_C368-T10_good_115.390
SRP279888GastroGastrodia elata tuber 27.22
JuvenJuvenile tuber34.96
Mother_GastroMother tuber of Gastrodia elata 53.55
Mother_JuvenMother tuber of Juvenile 28.91