Detail information of GWHGAAEX002503/evm.TU.scaffold_120.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218781433|ref|YP_002432751.1|2.00E-23serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|747051266|ref|XP_011071722.1|0PREDICTED: calcium-dependent protein kinase 10-like [Sesamum indicum]
Swissprottr|Q9SSF8|CDPKU_ARATH0Calcium-dependent protein kinase 30
trEMBLtr|A0A061FW19|A0A061FW19_THECC0Calcium-dependent protein kinase 30 isoform 1 {ECO:0000313|EMBL:EOY21690.1}
TAIRAT1G188900calcium-dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000118645852649635-
Transcript Sequence

Network for GWHGAAEX002503

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase543087.40E-69
PF13499.5EF-hand_73544153.50E-08
PF13499.5EF-hand_74274892.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.670
SRR2545915Juvenile tuber50.480
SRP108465SRR5643513five period of Gastrodia elata7.080
SRR5643514five period of Gastrodia elata11.880
SRR5643515five period of Gastrodia elata9.420
SRR5643524five period of Gastrodia elata12.340
SRR5643525five period of Gastrodia elata8.620
SRR5643528five period of Gastrodia elata12.790
SRR5643658five period of Gastrodia elata5.070
SRR5643659five period of Gastrodia elata15.530
SRR5643660five period of Gastrodia elata17.410
SRR5643661five period of Gastrodia elata17.640
SRR5643662five period of Gastrodia elata11.320
SRR5643663five period of Gastrodia elata9.690
SRR5643664five period of Gastrodia elata10.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.760
SRR6049655Rhizomagastrodiae_C368-T10_good_12.940
SRR6049656Rhizomagastrodiae_C368-T07_good_111.260
SRR6049657Rhizomagastrodiae_C368-T07_good_13.970
SRR6049658Rhizomagastrodiae_C368-T04_good_15.840
SRR6049659Rhizomagastrodiae_C368-T04_good_14.200
SRR6049660Rhizomagastrodiae_C368-T01_good_15.830
SRR6049661Rhizomagastrodiae_C368-T04_good_13.860
SRR6049662Rhizomagastrodiae_C368-T01_good_110.990
SRR6049663Rhizomagastrodiae_C368-T01_good_117.350
SRR6049664Rhizomagastrodiae_C368-T10_good_112.540
SRR6049665Rhizomagastrodiae_C368-T10_good_112.540
SRP279888GastroGastrodia elata tuber 6.79
JuvenJuvenile tuber17.52
Mother_GastroMother tuber of Gastrodia elata 25.83
Mother_JuvenMother tuber of Juvenile 11.19