Detail information of GWHGAAEX002517/evm.TU.scaffold_120.44_evm.TU.scaffold_120.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG45633.00E-65Cell cycle-regulated histone H1-binding protein
nrgi|743883193|ref|XP_010909346.1|9.71E-137PREDICTED: protein HGV2 isoform X2 [Elaeis guineensis]
trEMBLtr|J3MI88|J3MI88_ORYBR9.00E-120Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G11200.1}
TAIRAT4G372103.00E-65Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011815319821577561-
Transcript Sequence

Network for GWHGAAEX002517

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms87.230
SRR2545915Juvenile tuber95.970
SRP108465SRR5643513five period of Gastrodia elata52.140
SRR5643514five period of Gastrodia elata55.110
SRR5643515five period of Gastrodia elata48.170
SRR5643524five period of Gastrodia elata48.530
SRR5643525five period of Gastrodia elata34.900
SRR5643528five period of Gastrodia elata33.850
SRR5643658five period of Gastrodia elata36.130
SRR5643659five period of Gastrodia elata52.450
SRR5643660five period of Gastrodia elata49.300
SRR5643661five period of Gastrodia elata50.540
SRR5643662five period of Gastrodia elata47.860
SRR5643663five period of Gastrodia elata50.740
SRR5643664five period of Gastrodia elata53.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_173.270
SRR6049655Rhizomagastrodiae_C368-T10_good_157.410
SRR6049656Rhizomagastrodiae_C368-T07_good_173.560
SRR6049657Rhizomagastrodiae_C368-T07_good_180.960
SRR6049658Rhizomagastrodiae_C368-T04_good_182.870
SRR6049659Rhizomagastrodiae_C368-T04_good_179.470
SRR6049660Rhizomagastrodiae_C368-T01_good_180.670
SRR6049661Rhizomagastrodiae_C368-T04_good_178.670
SRR6049662Rhizomagastrodiae_C368-T01_good_170.730
SRR6049663Rhizomagastrodiae_C368-T01_good_173.630
SRR6049664Rhizomagastrodiae_C368-T10_good_163.520
SRR6049665Rhizomagastrodiae_C368-T10_good_163.520
SRP279888GastroGastrodia elata tuber 101.27
JuvenJuvenile tuber103.02
Mother_GastroMother tuber of Gastrodia elata 62.83
Mother_JuvenMother tuber of Juvenile 75.94