Gene detail

Detail information of GWHGAAEX002528/evm.TU.scaffold_120.57

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|20090798\|ref\|NP_616873.1\|	6.00E-30	hypothetical protein MA1950 [Methanosarcina acetivorans C2A]
KOG	KOG2142	0	Molybdenum cofactor sulfurase
nr	gi\|743856477\|ref\|XP_010941871.1\|	0	PREDICTED: uncharacterized protein LOC105060017 [Elaeis guineensis]
Swissprot	tr\|Q9C5X8\|MOCOS_ARATH	2.00E-17	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|W9QJL4\|W9QJL4_9ROSA	0	Uncharacterized protein {ECO:0000313\|EMBL:EXB38620.1}
TAIR	AT4G37100	0	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000118	1940694	1943516	-

Transcript Sequence
>GWHTAAEX002528 ATGCATCTGTCACTATGGAAGCCCATATCCCACTGCGCCTCTCTGTTCATAGACAAGAAGAAGAACCGGTGGAGAGATGGCGGTATCGACTGCTCCGACGATTCCGTCAAGCAACGGAAATCTTCTATTCTTCGGCAACTCCAAGAAAGCAAGCTCCGCGAAGCCCTAGAGGAGGCCTCTGAGGACGGCTCCCTCTTCAAATCCCAGGACATCGACTCCGATGCCGTCGCTGGATTCGACGTTGGATCAGGCGGAAATAGTTCCGTCGGACGGTCGAGATCCCTCGCCCGTCTCCACGCCCAGAAGGAATTCCTCCGCGCCACCGCTCGCGCAGTCGATCGCACCTTCCAATCCTTTGATTCCATTCCCGAGCTCGAGGAATGCTACAGCAAGTTCGTCGCCATGTACCCTAACTACCTATCTTCCGAACTCATCGATCGGCTCCGCGCCGACGATTACAGTCATCTGGACGAGGACGACTCCAAGGTATGCCTTGATTACTGCGGCTTCGGCCTGTTCTCTTTCCTTCAGAGTTTCCAGCATTGGGAGTCATCCGCTTTCAGCCTCTCTGAGATCACCTCAAACTTGAGCAACCATGCCATCTATGGAGGCGCGGAGAGAGGCACAGCTGAGGATGACATCAAAACTCGAATAATGGATTACCTGAACATTCCTGAGAGTGAGTATGGGCTCGTATTTACTGTCAGCCGAGGATCCGCCTTCCGATTGCTGGCGGAATCCTATCCTTTTCAAACCAACAAGAAGCTCCTCACGATGTTCGACCATGAGAGTCAGTCTGTGATTTGGATGGTGCAGAGTGCCAGGGAGAAGGGGGCAAAGGCTTATAACGCGAGTTTCAAGTGGCCGACTCTCAAGGTGTGCAATTCAGAGCTTAGGAAACGGATATCGAGCAAGAAGAGGAGGAAGAGGGATTCTGCTGTGGGGCTCTTCGTGTTCCCTGTTCAATCCAGGGTTAGTGGGGCAACTTATCCTTACCAGTGGATGGCTTTGGCTCAGCAGAATAACTGGCATGTGTTGCTGGATGCTGGATCTTTGGGTCCTAAGGACATGGATTCACTTGGATTGTCTCTTTATAGGCCTGATTTCATTATAACTTCATTCTACAGGGTGTTTGGATCAGATCCTACTGGTTTTGGCTGCCTTCTTATCAAGAAATCAGTGATGGGCTGTTTGCAGAATCAGAATGGTGGCACTGGAACCGGAATGGTGAGGATTCTGCCTGTTTTTCCCCAGTATTTGAGTGATTCTGTGGATGGGTTGGATGGGTTTGATGCAATTGGAAAGGACCAGATTGATGGCATTGATAAGTCCACGAAGCCTGGTACTACTAGCCAAGCATCTCAGATGCCTGCTTTCTCTGGTGCATTTACATCGGCTCAGGTTAGAGATGTGTTAGAGACTGAAATGGAACAGGATAATAGCTCTGACAGGGACGGAGCCAGCACAATATTCGAAGAATCAGAAAGCGTCTCGATCGGAGAGGTGATGAAGAGCCCTGTTTTCAGTGAAGATGACTCTTCCGATAATTCTCTGTGGATTGATCTGGGTCAGAGTCCCTTGGGTTCGGATAACTCGGGCCATCTCAGTAGAGGCAATCTGGGTTCTCCAATGCCTCCTTCATGGTTTTCCAGCAGGAAGAATCATAATAGAGCATCCCCAAAGGCACCTTTAAAAAGAAGCCCAATGCATGAAGAACATGTGCTTTCTTTTGATGCAGCAGTCTTGTCAGTTTCACAGGATTTGAACCAGGCCAAGGAAAACCAAGGAGAAAGGCCTCATACTAGCGAGATTCATGAAGAGCTTGATAATGGGATTGCGGGGAGGCGAGCAGTGAAGTTCTGCTCTGTAAATGGAGGGAAGCCTAGCAGCTCAGCAATGGGGTTTGGACGCCATAACTTTCACGAAAACGGCTCGACATCTGTTGTTTTAATCGAGGAAGGTATGAAGGGGATTAAAGAGAGCGCCATAAGAAGGGAGACTGAAGGTGAATTCAGATTATTGGGGAGGAGGGATGGAAACAATGCCAGGTTCAATTGCGGCAGGTTCTTCAGCACGGAGGATAATGAGCGTGTCATAAGCATGGGTCCTAGGGTTTCGTTCAGCGCCGAAGATGCGATGAAGCCTACAGGAAATTTTTTGCGCAATTTAGATGGAGGGGAAGCTATTCCTCACAATCTTGTTGATGCTGAAGCTTCCAGCGGCAGTGACTATGAGAATGATCATGAGTGGAGCAGAAGAGAATCTGAAATAGTTTGCAGGCATATTGATCATGTTAATATGCTTGGCCTGAATAAAACCACCTTGCGGCTCCGGTATCTTGTCAACTGGCTTGTCACCTCATTGCTTCACTTGAGGCTACCGGCATCGGAAGGGGAAGATGGGGTGCCTCTTATTCGCATCTACGGGCCAAAGATCAAGTACGAGAGGGGTGCGTCTGTGGCTTTCAATGTCAGGAATGCTCGTGGGGGTTTGATACACCCTGAAACTGTCCAGAAGCTGGCTGAAAGGAATGGGATCTCTTTGGGAATAGGGTTTCTCAGCCATATAAAGGTTTTGGACAACCCTAAGGTGCTTCATGGGGCTGTCGAATTTGGAGATTCTTCCTTGTGCCACCCTGTATCAATCGGTCATTGTGATGGTAAGAATGCGACTATTCGAGTGGAGGTTGTTACCGCGTCTCTAGGATTCCTCACAAATTTTGCGGATGTGTACAAGATGTGGTCTTTTATGGCCAGGTTCCTCGATCCATTGTTTGTCGAAAGCGACGGCTTGTCTGTCGTTGCAGAGATCCCCGAGGCATAG

Network for GWHGAAEX002528

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.200
SRP064423	SRR2545915	Juvenile tuber	24.380
SRP108465	SRR5643513	five period of Gastrodia elata	20.000
	SRR5643514	five period of Gastrodia elata	17.420
	SRR5643515	five period of Gastrodia elata	15.520
	SRR5643524	five period of Gastrodia elata	18.540
	SRR5643525	five period of Gastrodia elata	27.620
	SRR5643528	five period of Gastrodia elata	20.000
	SRR5643658	five period of Gastrodia elata	22.120
	SRR5643659	five period of Gastrodia elata	19.290
	SRR5643660	five period of Gastrodia elata	17.260
	SRR5643661	five period of Gastrodia elata	18.530
	SRR5643662	five period of Gastrodia elata	15.990
	SRR5643663	five period of Gastrodia elata	17.660
	SRR5643664	five period of Gastrodia elata	14.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	22.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	23.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.560
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.190
SRP279888	Gastro	Gastrodia elata tuber	15.97
	Juven	Juvenile tuber	22.50
	Mother_Gastro	Mother tuber of Gastrodia elata	17.04
	Mother_Juven	Mother tuber of Juvenile	14.75