Detail information of GWHGAAEX002532/evm.TU.scaffold_120.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|310828891|ref|YP_003961248.1|2.00E-24hypothetical protein [Eubacterium limosum KIST612]
KOGKOG11870Serine/threonine protein kinase
nrgi|695024176|ref|XP_009399289.1|0PREDICTED: proline-rich receptor-like protein kinase PERK4 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ZNQ8|PERK4_ARATH0Proline-rich receptor-like protein kinase PERK4
trEMBLtr|M0SUY8|M0SUY8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02090_001}
TAIRAT2G184700roline-rich extensin-like receptor kinase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011820215742038201-
Transcript Sequence

Network for GWHGAAEX002532

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr2385083.10E-42
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.000
SRR2545915Juvenile tuber13.500
SRP108465SRR5643513five period of Gastrodia elata20.770
SRR5643514five period of Gastrodia elata27.430
SRR5643515five period of Gastrodia elata19.690
SRR5643524five period of Gastrodia elata26.580
SRR5643525five period of Gastrodia elata12.780
SRR5643528five period of Gastrodia elata19.490
SRR5643658five period of Gastrodia elata14.800
SRR5643659five period of Gastrodia elata21.990
SRR5643660five period of Gastrodia elata24.480
SRR5643661five period of Gastrodia elata25.550
SRR5643662five period of Gastrodia elata22.710
SRR5643663five period of Gastrodia elata25.410
SRR5643664five period of Gastrodia elata22.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.110
SRR6049655Rhizomagastrodiae_C368-T10_good_127.000
SRR6049656Rhizomagastrodiae_C368-T07_good_116.450
SRR6049657Rhizomagastrodiae_C368-T07_good_114.510
SRR6049658Rhizomagastrodiae_C368-T04_good_112.950
SRR6049659Rhizomagastrodiae_C368-T04_good_111.900
SRR6049660Rhizomagastrodiae_C368-T01_good_112.670
SRR6049661Rhizomagastrodiae_C368-T04_good_111.280
SRR6049662Rhizomagastrodiae_C368-T01_good_115.100
SRR6049663Rhizomagastrodiae_C368-T01_good_115.650
SRR6049664Rhizomagastrodiae_C368-T10_good_120.180
SRR6049665Rhizomagastrodiae_C368-T10_good_120.180
SRP279888GastroGastrodia elata tuber 20.52
JuvenJuvenile tuber22.12
Mother_GastroMother tuber of Gastrodia elata 33.70
Mother_JuvenMother tuber of Juvenile 35.74