Gene detail

Database	Orthologs	E value	Annotation
nr	gi\|476001799\|gb\|AGI62041.1\|	1.28E-131	AP2-5 [Erycina pusilla]
Swissprot	tr\|Q6X5Y6\|WRI1_ARATH	1.00E-101	Ethylene-responsive transcription factor WRI1
trEMBL	tr\|M9QTQ4\|M9QTQ4_9ASPA	5.00E-132	AP2-5 {ECO:0000313\|EMBL:AGI62041.1}
TAIR	AT3G54320	2.00E-86	Integrase-type DNA-binding superfamily protein

Scaffold	Start	End	Strand
GWHAAEX00000118	3123694	3126075	+

Transcript Sequence
>GWHTAAEX002539 AAAAATAGCAGGATGGAAAAATCAAATGCCGGTCTATCTTCTCCTCAACCCCCTCAGACTAGTCTTTCTTCGACAAAAACTTCCAGTTGCCTTTCCAAGCCAAGGCCGAAGAGAAGCAAGAGCGCTTTGAGCTCAGACAAGCCTAATGCGGGTGGAAGCAATATCTGTGGGAAGAGAAGCTCTATCTATAGAGGAGTCACAAGGCATAGGTGGACTGGAAGGTTTGAAGCCCACCTGTGGGATAAGCATAGCTGGAATCTCATGCAGAACAAGAAAGGCAGGCAAGTTTATTTGGGGGCATATGATGATGAGGAGGCTGCAGCTCGCACTTACGATCTTGCGGCGCTGAAATACTGGGGTCCTGACACAGTGCTTAACTTTCCGGCGACTACCTATCTGAAGGAGTTTGAGGAGATGCAGAATTTGTCCAAGGAGGAATACTTGGCTACTCTCAGGCGGAGGAGCAGTGGTTTCTCCAGAGGAGTATCTAAATACAGAGGGGTTGCAAGGCATCACCACAACGGTCGGTGGGAGGCCCGGATTGGACGCGTGCACGGCAACAAATACCTTTATTTGGGAACATTCAGCACTCAAGAAGAGGCGGCGCAAGCCTATGACATGGCTGCCTTGGAGTATAGAGGCCGTAATGCAGTGACTAACTTTGACATCAGCAGCTACATGAAGAATCAGCCTTCATCGATAGCACCAATGCTAGATGTTGATCCTCCGATGGTTATGACGCCCTCCTCGTCTTCATTCGAGGCTCACGAGTTCATTTACAATCATTCTCATGCGGAGCTTCCGGCAATCAAGGATTGTTACAATATTCGAAACCCTGATAGCTCCAGCAACAACTTCTTATGGTCAGCCATAGACAAGGACCTCGACTTGCCTCAACAAGTTAATTTAGAAGAGTCTAATAGCATGATGCTCTTTGATTTGTTCGACTGTATTGAATTTGAAGAGGATATCGAGCAACTCTTCGAAGAAATAGACTCTGAAATTACTAACATTAATGGCAACCAGAGTATTGACAACGACGATGATGGTGGCGAGCTGCCCAACGAGAAACTAGTGGCAACTCCTTATCCTCCGCAAGTTAGTATATGCTCTTAGCAATTATTGCTCAATTGTGCTTCGTTTTGTTGTGGCGGTTGGATTTGGCATGACTTTAATGTTTGCTTCAAATTTATGTTTATGATGAATATTCATTATTAATTTGAGAGTTTGTATTTCATATTTTTTTCCCTGATAATTTAATCGTTGTATTAGTGGAGAATTTCTTTTGTTCTTGTCAAGTGGTGATGTTCAACTCAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module2

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00847.19	AP2	58	116	2.40E-10
PF00847.19	AP2	159	210	6.70E-12

Protein Sequence

Gene family	subfamily
Transcription Factors Family	AP2/ERF-AP2

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.660
SRP064423	SRR2545915	Juvenile tuber	14.980
SRP108465	SRR5643513	five period of Gastrodia elata	3.450
	SRR5643514	five period of Gastrodia elata	4.160
	SRR5643515	five period of Gastrodia elata	1.310
	SRR5643524	five period of Gastrodia elata	1.910
	SRR5643525	five period of Gastrodia elata	2.620
	SRR5643528	five period of Gastrodia elata	3.100
	SRR5643658	five period of Gastrodia elata	9.340
	SRR5643659	five period of Gastrodia elata	0.210
	SRR5643660	five period of Gastrodia elata	0.230
	SRR5643661	five period of Gastrodia elata	0.230
	SRR5643662	five period of Gastrodia elata	0.230
	SRR5643663	five period of Gastrodia elata	0.090
	SRR5643664	five period of Gastrodia elata	0.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.500
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.560
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.990
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.290
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.080
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.120
SRP279888	Gastro	Gastrodia elata tuber	0.46
	Juven	Juvenile tuber	0.24
	Mother_Gastro	Mother tuber of Gastrodia elata	1.83
	Mother_Juven	Mother tuber of Juvenile	1.19