Detail information of GWHGAAEX002543/evm.TU.scaffold_121.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313116936|ref|YP_004038060.1|2.00E-28cytochrome P450 [Halogeometricum borinquense DSM 11551]
KOGKOG01560Cytochrome P450 CYP2 subfamily
nrgi|695013105|ref|XP_009393330.1|0PREDICTED: cytochrome P450 77A3-like [Musa acuminata subsp. malaccensis]
Swissprottr|O48928|C77A3_SOYBN4.00E-150Cytochrome P450 77A3
trEMBLtr|J3MGW6|J3MGW6_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB06G32600.1}
TAIRAT1G116000cytochrome P450, family 77, subfamily B, polypeptide 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000125128864131384+
Transcript Sequence

Network for GWHGAAEX002543

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450425075.60E-85
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP77B1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005506Molecular Functioniron ion binding
GO:0020037Molecular Functionheme binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.790
SRR2545915Juvenile tuber12.090
SRP108465SRR5643513five period of Gastrodia elata57.850
SRR5643514five period of Gastrodia elata44.260
SRR5643515five period of Gastrodia elata27.450
SRR5643524five period of Gastrodia elata39.260
SRR5643525five period of Gastrodia elata18.690
SRR5643528five period of Gastrodia elata6.420
SRR5643658five period of Gastrodia elata60.530
SRR5643659five period of Gastrodia elata15.870
SRR5643660five period of Gastrodia elata10.780
SRR5643661five period of Gastrodia elata10.760
SRR5643662five period of Gastrodia elata11.500
SRR5643663five period of Gastrodia elata14.290
SRR5643664five period of Gastrodia elata6.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.230
SRR6049655Rhizomagastrodiae_C368-T10_good_137.540
SRR6049656Rhizomagastrodiae_C368-T07_good_126.210
SRR6049657Rhizomagastrodiae_C368-T07_good_127.820
SRR6049658Rhizomagastrodiae_C368-T04_good_113.890
SRR6049659Rhizomagastrodiae_C368-T04_good_110.110
SRR6049660Rhizomagastrodiae_C368-T01_good_111.820
SRR6049661Rhizomagastrodiae_C368-T04_good_134.850
SRR6049662Rhizomagastrodiae_C368-T01_good_132.970
SRR6049663Rhizomagastrodiae_C368-T01_good_112.590
SRR6049664Rhizomagastrodiae_C368-T10_good_131.430
SRR6049665Rhizomagastrodiae_C368-T10_good_131.430
SRP279888GastroGastrodia elata tuber 11.14
JuvenJuvenile tuber11.72
Mother_GastroMother tuber of Gastrodia elata 10.01
Mother_JuvenMother tuber of Juvenile 9.69