Gene detail

Detail information of GWHGAAEX002554/evm.TU.scaffold_121.15

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|392409942\|ref\|YP_006446549.1\|	5.00E-68	chaperone protein DnaK [Desulfomonile tiedjei DSM 6799]
KOG	KOG0103	0	Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily
nr	gi\|743820507\|ref\|XP_010931798.1\|	0	PREDICTED: heat shock 70 kDa protein 16 [Elaeis guineensis]
Swissprot	tr\|Q9SAB1\|HSP7Q_ARATH	0	Heat shock 70 kDa protein 16
trEMBL	tr\|M0RGX5\|M0RGX5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P09990_001}
TAIR	AT1G11660	0	heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000125	441886	487310	+

Transcript Sequence
>GWHTAAEX002554 GTTGCTTCTCTTTGTGTATTTTATTTATGTTTGTTCCTTCTCTTTGTGTAAGTTGCTTCTCTTTGTGTATTTTATTTATGTTTGTTCCTTCTCTTTGTGTATTTCTAACTCCCTCGCACCCCATCCCGGCATCTACCGAGGCCGCTCGCCTTCCAGTACAAATGGAGACTCGAATCCATGGTTTCCCACTTATCTAGGGTTTATGCGGTCCCATTTTTCTACGGGTATCCGTTATTCACTGCTGGACTAACCTAGGGTTCCAGCGCCGGAACCATGAGCGTCATAGGATTCGACGTTGGAAATGAAAATTGTGTGATCGCTGTTGTGAAGAAGCGCGGCATCGACGTTCTTCTCAACGATGAGTCCAAGCGCGAAACTCCCGCTGTGCTCTCCTTCGGCGAGAAGCAGCGGTTTCTCGGTTCAGCCGGCGCTGCAACTGCTGCGATGCACACAAAATCCACCATCTCTCAGTTGAAGCGTCTCATCGGTCGGAGATTTCGCCAGCCGGATGTCCAGGAGGATCTTCGCCGCTTCCCGTTCGACACATCAGAGGGCGTCGATGGCGGGATCGAAATCCGTATTCGATACATGAACGAGGAGCGAATCTTCACGCCGGTGCAGATCCTCGGAATGCTTTTCTCTCATTTAAAGCAGATTGCGGAGAAGAATCTTCAGAGCCCGGTGACTGATTGTGTTATTGGGATACCTTCTTACTTCACTGATTCTCAAAGGAGGGCTTATTTGAACGCGGCAGCTATTGCAGGACTGAAACCGCTTAGGCTAATGCATGACTTGGCGGCCACTGCTTTAGGGTATGGTATCTACAAGTCTGATTTCCCAAACTCCCGAGAACCGATCAATGTTGCTTTTGTTGATATTGGCCATTGCGACACTCAGGTATCGGTGGTGGCATTTGAGGCTGGTCAAATGAGAGTAATCTCTCATGCTTCTGATCCGAATTTAGGTGGCAGGGATTTTGATGAGGTGCTATTTAGGTACTTTGCCGAAGAATTCAAGGAGCATTATAAAATTGATGTGTATTGCAATATAAGGGCTTGCGTTAGACTGAGGAGCTCTTGCGAGAAACTGAAGAAGGTTCTCAGTGCGAATGCTGAGGCCCCTCTTAGTATAGAATGCTTAATGGAAGAAAAGGATGTGAAGGGATTCATAAAAAGAGAAGAGTTTGAGAGGCTATCATTAAGTTTGCTGGAGAGGGTTTTGGAGCCTTGTAAGAAGGCTGTGTTTGAAGCTGGGTTGCAAGTGGACAGAATACAGTTTGTAGAGCTTGTGGGCTCAGGGTCAAGGATTCCAGCAGTGGCGAGAATTTTGTCTGGATTTTTTGGGAGAGAGCCCGGTAGATCACTTAATGCAAGCGAATGTGTAGCTCGCGGGTGTGCACTCCAGTGCGCTATGCTTAGCCCTATATTCAGGGTTAGAGACTACGAGGTCCAAGATTCTTTTCCGTTCTCAATTGGCTTTTCTTCGGAGGACGTTCCTATTTCCACATTGTCAAATAACACATTATTTCAGAAAGGACAGCTTTTTCCAAGTGTTAAAATGCTTACATTTCACCGTACTGATACATTTCATTTGAAAGCTTTTTATACTGATCAAAATGAATTGCCAGATGACACTTCTCCTGAAATAAGCTGCTTCAAGATTGGTCCTTTCCATGTTTCTCAAATCGATAAAACCAAATTGAAAGTCAAGGTTCGGCTAAATCTTCATGGAATTGTTTTGGTAGAATCAGCTTCGTTGATTGAAGAGGAACCAAATGTTTCAAGTAATTCAAGCCGCTCAGATTTGGACAGCTCAGAATATATGACAGCCTCAGAAGCTTCTGTTGAGAATGGAGCTTTTGCACGGAATAGTCATGTCAATCCATCAAGCAACAACAGGTATTCAAAAAGGCATGAGGTTCCAGTCGCTGAAATCATGTTTTGTAAAATGGGCAAAGCTGAACTAGCAGAAGCTCAGGAGCAAGAAAAGCTGCTAGCTTATCAAGACAAACTAATGGAACAAACCAAGGATAAAAAGAATGCCTTGGAAGCGTATGTCTATGAAGTCCGCAATAAGCTATTGGAGAGATATAGAAGCTTTGCTACGGAGAAGGAGAAGGAAGAAATCTCCCGTAGCCTTCAGCAGACTGAAGAGTGGCTTTATGAGGATGGTGTAGATGAAACTGAGAGGGTCTACACGGACAAGCTGGATGAATTAACAAAGTTGGTTGATCCTATTGAGGACAGATGCAAGGACGAAGAAATCAGAGCTCAGGCAACAAGGGACCTCCTTAACTGCATTGTCGAGCATCGGATGGCCACAAAATCTCTGCCAACAAGTGAAAGCGATGCGATCATTGGCGAATGCGGAAAAGCCGAGCAGTGGCTTAGGGAGAGATCTCAGCTGCAGGATGGATGGCCCAAGCACTCTGATCCTCTGCTTTGGTCTCATGAAATCATTAGCATGATCGAAGCGCTGAACTCGTCGTGCAGAAATATATCGAGAGCTTCTAAAGGTCCTTCGTCGAGGCCTGAGGATGACAGCCAAGGTTTTTAACCCGTGGCAGGGGGTTTGATTTTGTCGTCGAGATTATTAATCATGACCTCTGATCATCCGAGCATTGCGAGGGTTGAACGGGTGGTGATTGTGATTTTATCAGTAGTTTTGTAAAAAAAAAAATTTAATTGGGTGTTAGATGTCTAAATGAGAAAATGTTAGGTGCATGCATTAAATTCTATTCATATATATATATATATATA

Network for GWHGAAEX002554

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00012.19	HSP70	3	658	1.50E-148

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09489	HSPA4	Tight junction	map04530
K09489	HSPA4	Antigen processing and presentation	map04612

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.550
SRP064423	SRR2545915	Juvenile tuber	32.380
SRP108465	SRR5643513	five period of Gastrodia elata	30.200
	SRR5643514	five period of Gastrodia elata	31.230
	SRR5643515	five period of Gastrodia elata	30.710
	SRR5643524	five period of Gastrodia elata	30.170
	SRR5643525	five period of Gastrodia elata	28.540
	SRR5643528	five period of Gastrodia elata	28.180
	SRR5643658	five period of Gastrodia elata	26.840
	SRR5643659	five period of Gastrodia elata	38.260
	SRR5643660	five period of Gastrodia elata	39.580
	SRR5643661	five period of Gastrodia elata	37.350
	SRR5643662	five period of Gastrodia elata	38.420
	SRR5643663	five period of Gastrodia elata	40.530
	SRR5643664	five period of Gastrodia elata	37.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.710
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	36.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.370
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.370
SRP279888	Gastro	Gastrodia elata tuber	41.24
	Juven	Juvenile tuber	49.38
	Mother_Gastro	Mother tuber of Gastrodia elata	39.94
	Mother_Juven	Mother tuber of Juvenile	43.95