Detail information of GWHGAAEX002557/evm.TU.scaffold_121.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32885.00E-124OTU-like cysteine protease
nrgi|743820467|ref|XP_010931787.1|1.48E-130PREDICTED: ubiquitin thioesterase OTU1 isoform X1 [Elaeis guineensis]
trEMBLtr|J3L9V2|J3L9V2_ORYBR1.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G14190.1}
TAIRAT1G506705.00E-124OTU-like cysteine protease family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000125536788553154-
Transcript Sequence

Network for GWHGAAEX002557

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02338.18OTU12991.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyOTU

KEGG pathway

KO Enzyme pathway mapID
K13719OTU1, YOD1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.900
SRR2545915Juvenile tuber19.130
SRP108465SRR5643513five period of Gastrodia elata26.650
SRR5643514five period of Gastrodia elata32.880
SRR5643515five period of Gastrodia elata31.600
SRR5643524five period of Gastrodia elata31.090
SRR5643525five period of Gastrodia elata45.900
SRR5643528five period of Gastrodia elata48.960
SRR5643658five period of Gastrodia elata46.990
SRR5643659five period of Gastrodia elata32.380
SRR5643660five period of Gastrodia elata30.860
SRR5643661five period of Gastrodia elata30.710
SRR5643662five period of Gastrodia elata33.940
SRR5643663five period of Gastrodia elata31.590
SRR5643664five period of Gastrodia elata23.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.480
SRR6049655Rhizomagastrodiae_C368-T10_good_127.010
SRR6049656Rhizomagastrodiae_C368-T07_good_127.580
SRR6049657Rhizomagastrodiae_C368-T07_good_123.890
SRR6049658Rhizomagastrodiae_C368-T04_good_125.860
SRR6049659Rhizomagastrodiae_C368-T04_good_122.240
SRR6049660Rhizomagastrodiae_C368-T01_good_125.580
SRR6049661Rhizomagastrodiae_C368-T04_good_127.350
SRR6049662Rhizomagastrodiae_C368-T01_good_128.020
SRR6049663Rhizomagastrodiae_C368-T01_good_127.940
SRR6049664Rhizomagastrodiae_C368-T10_good_138.700
SRR6049665Rhizomagastrodiae_C368-T10_good_138.700
SRP279888GastroGastrodia elata tuber 34.28
JuvenJuvenile tuber20.39
Mother_GastroMother tuber of Gastrodia elata 48.19
Mother_JuvenMother tuber of Juvenile 28.13