Detail information of GWHGAAEX002559/evm.TU.scaffold_121.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17708.00E-67Translation initiation factor 1 (eIF-1/SUI1)
nrgi|697170896|ref|XP_009594373.1|2.15E-69PREDICTED: protein translation factor SUI1 homolog [Nicotiana tomentosiformis]
Swissprottr|P41568|SUI11_ARATH2.00E-67Protein translation factor SUI1 homolog 1
trEMBLtr|K4CH98|K4CH98_SOLLC1.00E-69Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g064150.2.1}
TAIRAT4G271308.00E-67Translation initiation factor SUI1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000125586357589825-
Transcript Sequence

Network for GWHGAAEX002559

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01253.21SUI1281029.50E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03113EIF1, SUI1 RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0006413Biological Processtranslational initiation
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2241.310
SRR2545915Juvenile tuber1315.990
SRP108465SRR5643513five period of Gastrodia elata686.360
SRR5643514five period of Gastrodia elata675.070
SRR5643515five period of Gastrodia elata602.950
SRR5643524five period of Gastrodia elata646.710
SRR5643525five period of Gastrodia elata886.920
SRR5643528five period of Gastrodia elata799.750
SRR5643658five period of Gastrodia elata923.450
SRR5643659five period of Gastrodia elata618.660
SRR5643660five period of Gastrodia elata678.480
SRR5643661five period of Gastrodia elata675.380
SRR5643662five period of Gastrodia elata747.780
SRR5643663five period of Gastrodia elata749.200
SRR5643664five period of Gastrodia elata952.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11150.540
SRR6049655Rhizomagastrodiae_C368-T10_good_1728.820
SRR6049656Rhizomagastrodiae_C368-T07_good_11060.480
SRR6049657Rhizomagastrodiae_C368-T07_good_11410.020
SRR6049658Rhizomagastrodiae_C368-T04_good_11518.980
SRR6049659Rhizomagastrodiae_C368-T04_good_11701.200
SRR6049660Rhizomagastrodiae_C368-T01_good_11258.720
SRR6049661Rhizomagastrodiae_C368-T04_good_11392.260
SRR6049662Rhizomagastrodiae_C368-T01_good_1784.260
SRR6049663Rhizomagastrodiae_C368-T01_good_1927.950
SRR6049664Rhizomagastrodiae_C368-T10_good_1837.500
SRR6049665Rhizomagastrodiae_C368-T10_good_1837.500
SRP279888GastroGastrodia elata tuber 1,089.51
JuvenJuvenile tuber501.70
Mother_GastroMother tuber of Gastrodia elata 513.21
Mother_JuvenMother tuber of Juvenile 445.39