Detail information of GWHGAAEX002560/evm.TU.scaffold_121.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16546.00E-75Microtubule-associated anchor protein involved in autophagy and membrane trafficking
nrgi|743793138|ref|XP_010923852.1|2.50E-78PREDICTED: autophagy-related protein 8C-like isoform X3 [Elaeis guineensis]
Swissprottr|Q6Z1D5|ATG8C_ORYSJ8.00E-78Autophagy-related protein 8C (Precursor)
trEMBLtr|M0SQU1|M0SQU1_MUSAM5.00E-78Autophagy-related protein {ECO:0000256|RuleBase:RU004384}
TAIRAT1G620406.00E-75Ubiquitin-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000125591661596029-
Transcript Sequence

Network for GWHGAAEX002560

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02991.15Atg8141172.30E-52
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K08341GABARAP, ATG8, LC3 Apelin signaling pathway map04371
FoxO signaling pathwaymap04068
Autophagy - animalmap04140
Autophagy - yeastmap04138
Autophagy - othermap04136
Mitophagy - animalmap04137
Mitophagy - yeastmap04139
NOD-like receptor signaling pathwaymap04621
GABAergic synapsemap04727
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms157.730
SRR2545915Juvenile tuber128.570
SRP108465SRR5643513five period of Gastrodia elata119.310
SRR5643514five period of Gastrodia elata168.640
SRR5643515five period of Gastrodia elata136.200
SRR5643524five period of Gastrodia elata191.090
SRR5643525five period of Gastrodia elata260.160
SRR5643528five period of Gastrodia elata299.930
SRR5643658five period of Gastrodia elata377.050
SRR5643659five period of Gastrodia elata88.200
SRR5643660five period of Gastrodia elata78.070
SRR5643661five period of Gastrodia elata89.980
SRR5643662five period of Gastrodia elata92.500
SRR5643663five period of Gastrodia elata83.760
SRR5643664five period of Gastrodia elata101.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1104.440
SRR6049655Rhizomagastrodiae_C368-T10_good_1209.570
SRR6049656Rhizomagastrodiae_C368-T07_good_1120.420
SRR6049657Rhizomagastrodiae_C368-T07_good_1109.300
SRR6049658Rhizomagastrodiae_C368-T04_good_1120.120
SRR6049659Rhizomagastrodiae_C368-T04_good_1130.100
SRR6049660Rhizomagastrodiae_C368-T01_good_1106.100
SRR6049661Rhizomagastrodiae_C368-T04_good_1115.460
SRR6049662Rhizomagastrodiae_C368-T01_good_1105.680
SRR6049663Rhizomagastrodiae_C368-T01_good_1101.400
SRR6049664Rhizomagastrodiae_C368-T10_good_1142.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1142.250
SRP279888GastroGastrodia elata tuber 120.11
JuvenJuvenile tuber111.82
Mother_GastroMother tuber of Gastrodia elata 341.42
Mother_JuvenMother tuber of Juvenile 199.97