Detail information of GWHGAAEX002573/evm.TU.scaffold_121.35
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325280864|ref|YP_004253406.1| | 4.00E-29 | TIR protein [Odoribacter splanchnicus DSM 220712] |
| KOG | KOG0229 | 0 | Phosphatidylinositol-4-phosphate 5-kinase |
| nr | gi|743801864|ref|XP_010926458.1| | 0 | PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Elaeis guineensis] |
| Swissprot | tr|Q56YP2|PI5K1_ARATH | 0 | Phosphatidylinositol 4-phosphate 5-kinase 1 |
| trEMBL | tr|F6H0M1|F6H0M1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB45518.1} |
| TAIR | AT1G21980 | 0 | phosphatidylinositol-4-phosphate 5-kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000125 | 1071242 | 1076846 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002573
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02493.19 | MORN | 44 | 66 | 0.00073 |
| PF02493.19 | MORN | 67 | 88 | 3.00E-05 |
| PF02493.19 | MORN | 90 | 111 | 1.30E-05 |
| PF02493.19 | MORN | 113 | 134 | 0.2 |
| PF02493.19 | MORN | 136 | 157 | 1.20E-05 |
| PF02493.19 | MORN | 159 | 181 | 0.00024 |
| PF02493.19 | MORN | 182 | 201 | 0.14 |
| PF01504.17 | PIP5K | 382 | 694 | 1.20E-84 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046488 | Biological Process | phosphatidylinositol metabolic process |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0016308 | Molecular Function | 1-phosphatidylinositol-4-phosphate 5-kinase activity |
| GO:0016307 | Molecular Function | phosphatidylinositol phosphate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.590 |
| SRR2545915 | Juvenile tuber | 0.850 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.540 |
| SRR5643514 | five period of Gastrodia elata | 11.780 | |
| SRR5643515 | five period of Gastrodia elata | 6.440 | |
| SRR5643524 | five period of Gastrodia elata | 8.190 | |
| SRR5643525 | five period of Gastrodia elata | 9.360 | |
| SRR5643528 | five period of Gastrodia elata | 12.470 | |
| SRR5643658 | five period of Gastrodia elata | 14.140 | |
| SRR5643659 | five period of Gastrodia elata | 2.860 | |
| SRR5643660 | five period of Gastrodia elata | 2.960 | |
| SRR5643661 | five period of Gastrodia elata | 4.110 | |
| SRR5643662 | five period of Gastrodia elata | 2.030 | |
| SRR5643663 | five period of Gastrodia elata | 2.700 | |
| SRR5643664 | five period of Gastrodia elata | 2.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.540 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.350 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.780 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.050 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.710 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.370 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.460 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.45 |
| Juven | Juvenile tuber | 2.75 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.63 | |
| Mother_Juven | Mother tuber of Juvenile | 4.19 |