Detail information of GWHGAAEX002576/evm.TU.scaffold_121.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25680Predicted membrane protein
nrgi|672118128|ref|XP_008782263.1|0PREDICTED: transmembrane protein 87B-like isoform X2 [Phoenix dactylifera]
trEMBLtr|M0T5P5|M0T5P5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P09960_001}
TAIRAT2G010700Lung seven transmembrane receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012511518261155718-
Transcript Sequence

Network for GWHGAAEX002576

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06814.12Lung_7-TM_R1684567.30E-93
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.680
SRR2545915Juvenile tuber42.040
SRP108465SRR5643513five period of Gastrodia elata76.140
SRR5643514five period of Gastrodia elata78.580
SRR5643515five period of Gastrodia elata72.770
SRR5643524five period of Gastrodia elata73.260
SRR5643525five period of Gastrodia elata176.380
SRR5643528five period of Gastrodia elata144.840
SRR5643658five period of Gastrodia elata244.110
SRR5643659five period of Gastrodia elata71.600
SRR5643660five period of Gastrodia elata91.300
SRR5643661five period of Gastrodia elata80.240
SRR5643662five period of Gastrodia elata77.790
SRR5643663five period of Gastrodia elata73.160
SRR5643664five period of Gastrodia elata92.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_193.620
SRR6049655Rhizomagastrodiae_C368-T10_good_149.430
SRR6049656Rhizomagastrodiae_C368-T07_good_186.310
SRR6049657Rhizomagastrodiae_C368-T07_good_197.040
SRR6049658Rhizomagastrodiae_C368-T04_good_1107.270
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.390
SRR6049660Rhizomagastrodiae_C368-T01_good_1110.020
SRR6049661Rhizomagastrodiae_C368-T04_good_1101.640
SRR6049662Rhizomagastrodiae_C368-T01_good_187.230
SRR6049663Rhizomagastrodiae_C368-T01_good_1100.980
SRR6049664Rhizomagastrodiae_C368-T10_good_187.700
SRR6049665Rhizomagastrodiae_C368-T10_good_187.700
SRP279888GastroGastrodia elata tuber 81.40
JuvenJuvenile tuber75.55
Mother_GastroMother tuber of Gastrodia elata 165.60
Mother_JuvenMother tuber of Juvenile 105.54