Detail information of GWHGAAEX002579/evm.TU.scaffold_121.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325110901|ref|YP_004271969.1| | 1.00E-26 | serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305] |
| KOG | KOG0198 | 8.00E-147 | MEKK and related serine/threonine protein kinases |
| nr | gi|743772487|ref|XP_010916553.1| | 0 | PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Elaeis guineensis] |
| Swissprot | tr|Q39008|M3K1_ARATH | 2.00E-147 | Mitogen-activated protein kinase kinase kinase 1 |
| trEMBL | tr|B8AQA2|B8AQA2_ORYSI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:EEC76025.1} |
| TAIR | AT4G08500 | 8.00E-147 | MAPK/ERK kinase kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000125 | 1183151 | 1187517 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002579
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 327 | 578 | 4.20E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE11 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13414 | MEKK1 | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.280 |
| SRR2545915 | Juvenile tuber | 45.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.740 |
| SRR5643514 | five period of Gastrodia elata | 36.270 | |
| SRR5643515 | five period of Gastrodia elata | 68.190 | |
| SRR5643524 | five period of Gastrodia elata | 44.770 | |
| SRR5643525 | five period of Gastrodia elata | 53.650 | |
| SRR5643528 | five period of Gastrodia elata | 71.490 | |
| SRR5643658 | five period of Gastrodia elata | 41.420 | |
| SRR5643659 | five period of Gastrodia elata | 57.540 | |
| SRR5643660 | five period of Gastrodia elata | 35.410 | |
| SRR5643661 | five period of Gastrodia elata | 52.140 | |
| SRR5643662 | five period of Gastrodia elata | 65.620 | |
| SRR5643663 | five period of Gastrodia elata | 45.740 | |
| SRR5643664 | five period of Gastrodia elata | 99.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 54.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 38.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 46.540 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 43.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 36.360 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 38.030 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 67.270 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 43.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 41.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 64.060 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 37.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 37.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 35.68 |
| Juven | Juvenile tuber | 34.58 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 178.17 | |
| Mother_Juven | Mother tuber of Juvenile | 218.30 |