Gene detail

Detail information of GWHGAAEX002580/evm.TU.scaffold_121.42

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672162438\|ref\|XP_008801035.1\|	2.85E-132	PREDICTED: uncharacterized protein LOC103715244 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|F6H0M9\|F6H0M9_VITVI	1.00E-91	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45526.1}
TAIR	AT1G36990	4.00E-61	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000125	1188619	1205441	-

Transcript Sequence
>GWHTAAEX002580 TATCTATTTTTTCATGTTGCTAAAATCAAATAAAAACGTGGAGCAAGTGGAGAGAGAAAACCTTCCCCGTCGCCGTTTCCCTCCACCGTCTTTAATCCGAACCGTCACTGCTCCCAACTTCCTATTTCTGAAAACCCTAATCACTGAGAGCGATAAAAAGAGCGTGTGCGCGAGAGCTAGAGAAAGAACTAAGCTGCGTAAATTGTGAGAGAACCAAAGCAAAGTAAAGAAGAATATTGAGAGGATAGGCCATTTGTTTAAGGGAGTGATAAACAAGGAGACGAGGTTTCCTATCATCCCAATCGTGCCCGTTTCTTCAAATCTTCCCGTCCGATACAAGCGCTACTTTAATAGAAACTTGAAACATCTCGAGGACCTCAAGGTAAAAGGCTAGGTTTTCTCGGTCGGGTTTGAGCTTTCTGCTTCACAAAAAGGGTAGGCTGATTGCCTTTCTCGTTCATTATCAGTCCTTTCCTGTGTTGGCACCGGCGAAGCCGTGCAGTTTAGGGTTTATACGAAAAACGATATTTAAGCCGTTTTTGTTATTGGTTTCGCTCACTTGTTGTTTCGGGTTCTTCTTATGGGTCCGATGTGGAAGGAGATTATCGGTTCCTAGGGTCTTTATTTCTCTAGCCTTGTTTTGGGATCACCTTGAGCTTGAAAAATGAGACTCGTGAGGGTAGCCATGCTTTTTTAAGATATGGATTGCCTGTTATAACTGTGCAGAGTTTGGGGTATTGTCTTCTTAATTACGGAAGATGGAAAGGTCCATTTACTTTTGTAGCGTTGTTGCAGTCTTCTGAACCTTTATTTGGGTTGCCACGGTTGGATTTATGGACTTTTGCATAGTACCAGTTTTCTTGATTGGAAACATTAATTTTGCATAGCCTTGCTGTTTACAGCCGGCTGTCTTTTTTGAATGCTTAAATTTAAAGGAAGCGGTAGACATCTGTAATTAAGTGAAGAAAAGAGTCGTAGGATTAAGTTTTTGTTTATATTTTAGGGTGACAATTTAGTTACTTGCTTCAAATTTCTTGGGCTTATATGATGAGCCATCTCTGCAATGGAACGGAGTGAGCCTACTTTTGTTCCAGAGTGGTATAAAGGCTCAAACAGCAGTGCAACAAGCAGTGGAAATTCAAACCACCAAAGTGGGTTCCCTTCGCTGTCAGCAACAGATGTTCACAACAACAGCTTTTCATCAAGAAGCAGATTGCCAGCGAGCATCGGTGATTATGATGCTTCTCGCTCATCGTCTTTCTCAGAGAGAACTTCATCATCTTTTCGAAGAAGTTATAGTGGTAATGTTTATATTGTACGTGAGAAAGACATTTCTTCACGTACTTACAATAGTTTTGGCAGAAGTTATCGCGATAGGGATAAGGACCGAGAAAAGGACCTCGAAATCCATGATAGAGATAAGCCTCGTTTAGTGGACAATGAATTTGGTGACTATCCTGATACATTGATCCAGAACAAATCTGAAAAAGATCTCTTGAGGCATTCTCAATCAATGCTAGCTGGAAGGCGAGCTGATCCATGGCTGAAGAGAACTGGTCATGATTCGGGTATTACTATTCAGCCTATGGGGGGTAGGGGTAGATCCAGTGGTATTATCAAATCTTCATTTGAAAGAGAGTTTCCTTCACTTGGAGCTGAAGAAAAGCTTGCTGGATCAGATATAATTAGAGTATCTTCTCCTGGTTTAAGTACTGCTATTCACAATCTCCCTGTGACTGCTTCAACTCTAATTGGAGCTGATGGCTGGACATCTGCATTGGCAGAGGTTCCTATTGTAGGAGATGATGGTTCCATTGTTTTAACCTCTCTCCAGACTAATTCTACACTGACATCTACAGCTTCAAGTATTCCCACAGGCTTAAATATGGCCGAAACAGTGGCTCAGGCCCCTGCACGAACTCGCACAGCACCTCAGTTACCCAATGATTCCCAAAAGATCGAGGAATTACATCGTCAACAAATTTTGAAGCTTAGACCTGTGACTCCATCCATTCCAAAAAACATGGGTGCTAACCCAGCTGAGAAATCAAAAACAAAAGGACCAAAATTGGCTGAATACAGCAGTGCAAAGATGGGGCAGCACCCGTCATCCCAGCTTGTTAATCACCTTATTCGTCCTGGCGCCAAATCCGAAGCCCAGAGGATATCCCACCAATCTGGGAAATATCGTGTCCTTAATCGGGAAAGGAGCGGCGTGTCCCCTACTGATAAGGACAGCCTGCATTCAAGGAACGGGAGCAGAGTCTCAGCCTCGCCCGGCTTGCATGTCAAGGGCGGCAGTGCTCCCTCAGCCTCGTTTGGAGAGAAGAAGCCATCTTCTCAGGCCCAGAACCGCAACGACTTCTTCAATGCCCTCCGGAAGAAAATGTCTTCCAGCCACGAGAACGTTAACCGTGGCCCGCATTCCAGCTTGCCGGCACCCAGCTTTGAGAAGCCAGACGAGGAGGTCCCAGCAGATGCACTTTCTGTCGAGAAGAATGGCGCTTCTTCTTCGTCATCCGCCTCGCAGTGCCCGGCGGAAAACGGCAGCTGCTCATTAAGCTGCAAGGCTGCCGAAGAATCTGAGCGCTTGGTCCCGGATGAGGAAGAGGCGGCCTTTCTTCGATCCCTTGGTTGGGAGGAGAATGCCGGTGAAGATATTCTAACTCCTGAAGAAATTGAATCTTTTCTCACACAGTATAAAAAGAGGAAGCCAGTTTCAAAGCTGAGGATAACAAACAGGCCGAGCTCATCGTCGGAAGCAGAAGCCGAAGAAACCTCTATTGTTTGCTGAGACACCAAAGAAAGAGCCTTCAGTCCCTTCACTATTTGATGGCTGGAACTTACTGCTTGCCCTAAGCTATTATAAGCAGATAGAGAGAGAGAGAGGGAGCTGAGCTGTTTTTTTTATTTTTTTATTTTATTTTATTTTATTTT

Network for GWHGAAEX002580

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.910
SRP064423	SRR2545915	Juvenile tuber	13.480
SRP108465	SRR5643513	five period of Gastrodia elata	14.110
	SRR5643514	five period of Gastrodia elata	13.170
	SRR5643515	five period of Gastrodia elata	16.290
	SRR5643524	five period of Gastrodia elata	11.460
	SRR5643525	five period of Gastrodia elata	14.100
	SRR5643528	five period of Gastrodia elata	14.430
	SRR5643658	five period of Gastrodia elata	12.110
	SRR5643659	five period of Gastrodia elata	18.230
	SRR5643660	five period of Gastrodia elata	17.920
	SRR5643661	five period of Gastrodia elata	16.750
	SRR5643662	five period of Gastrodia elata	22.340
	SRR5643663	five period of Gastrodia elata	19.460
	SRR5643664	five period of Gastrodia elata	20.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.510
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.230
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.580
SRP279888	Gastro	Gastrodia elata tuber	16.85
	Juven	Juvenile tuber	12.19
	Mother_Gastro	Mother tuber of Gastrodia elata	16.04
	Mother_Juven	Mother tuber of Juvenile	11.17