Gene detail

Detail information of GWHGAAEX002582/evm.TU.scaffold_121.44

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2288	Galactosyltransferases
nr	gi\|743772499\|ref\|XP_010916559.1\|	PREDICTED: beta-1,3-galactosyltransferase 7-like [Elaeis guineensis]
Swissprot	tr\|Q6NQB7\|B3GT7_ARATH	Beta-1,3-galactosyltransferase 7
trEMBL	tr\|W1PMA7\|W1PMA7_AMBTC	Uncharacterized protein {ECO:0000313\|EMBL:ERN08285.1}
TAIR	AT1G05170	Galactosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000125	1312077	1315852	-

Transcript Sequence
>GWHTAAEX002582 GAAGAAGCTATACACGTTGCTAGGTTTCGCTTCTCAGCGGCCTCTTTCTCTCCAAGCCGTCGTCTTTGACTTCCTCTTTCCTTTTCCATTTGTCCTCTTGTCGTTGCGGGGTTTCTCCTCCTTTCAGATCCTCTCTGTCCTCTATTTCTTAAAGCCGTTTTCTTTGTTCGAATCGGTAGAAGATAGAGGGAAACGGAGGAGGAGAGGAATAATGATGAAACCGAGAAGCGGCGGCGCAGAGAGGAAAGTGTCGTCCAGATGGATCATTTTGCTTTGTCTAGCGAGCTTCGGGCTTGGAATTCTATTCACTGATAGGTTTCCGAACTTGAATAGGCGTGCAGATTCGAACAGGCAGATGATTTCTCAGCGGCGGCAGGAACAGGAGCTTCATGTTGTCTCCGAACATTGCGCAACTAAAAAGAAGCTTGATCAAGATAAAGATGTAATGGGGGAGGTCACAAGGACCCATGAAGCTATACACTTTTGGAATGTGAATGGCTTCAGATCTTTGGATAAAACAATATCAACTCTTCAGATGGAGCTTGCGGCCACTAGAAGCTCTCAAGAGCTCACGGGATCGAATGGTTCTCCAAGCATCGCTGCATCCACTCAGCAAAAAAAGAAGGCTTTCATTGTTATTGGGATCAATACAGCATTTAGCAGCAGAAAGAGGCGTGATTCTCTCAGAGAGACTTGGATGCCTCAAGGTGAGAAATTACAAGAATTAGAGCGTGAGAAGGGTATCATCATCAGGTTCATGATTGGCCACAGTGCTACCTCGAACAGCATTCTAGATAGGGCAATCGATTCAGAAGAAGAACAGCATAAAGACTTTCTTAGACTGGCTCATGTTGAAGGCTATCATGAACTGTCTGCAAAGACAAAGATATTCTTTTCCACAGCAGTTTCTTTGTGGGATGCTGAATTTTATGTCAAGGTGGATGATGATGTCCATGTTAACTTAGGTGTGTTGGCTGCAACTCTGGCTTACCATAGGTTCAAACCAAGGGTTTATATTGGTTGCATGAAATCTGGTCCAGTTCTTTCAAACAAGAATGTGAAGTATCATGAGCCAGAGTATTGGAAATTTGGGGAAGAAGGAAACAAATACTTCCGGCACGCAACGGGCCAAATCTACGCCATTTCAAAAGATTTAGCAACCTTTATTTCCATCAACCAACCTATACTCCACAAATTTGCAAATGAAGATGTTTCTCTTGGTTCTTGGTTTATTGGGCTTGAAGTTGACCATATCGATGACAGGAGCATGTGCTGTGGAACTCATCCAGATTGTGAATGGAAAGCTCAGGCAGGAAATGTGTGCGTGGCATCATTTGATTGGAGTTGCAGCGGTATATGCAAGTCTGTGGAGAGAATGAAGGAAGTGCACGCTCGCTGTGGGGAAGGAGATGGAGCTGTTTGGGGAGCTTTATTATGACCTCAACTCATTAGTTCGCTTTGAAGTGAGGGGTATTTCAAGTAGCAAGTCACAGGCTGCTAAAGCAGTATCCTCTGAAACTCTGATTTGGATGCTTGAGGATTTAGAGAGACTTTACTTTCCCCTCTTTGACAATAGATGATAATTTTGGATGGCAGAGGTTAAGATTGTGAATCATGAAATATTGATTCAAAGGAAATGATGTAGAGGTTGTATTTTCTGTAGGACTCTGAGCTTGTTTTTTTCATTCTTTTTTAGGTTATTGCAGGCTCAGTCTTGTATTATGGTAGTTCTGCAATACAAATAATTTTACACTTTTTTGAAATTCTGGAAGGGTAATTCAACACTAAATAATTGCCTTGTTGGAAAAGATACTTTGTTGTGTAAAAAGAGAATTGATACAATCGAATTGTGGGTTCTGTAATTTTCTTTTGAAAGAAATCGAGTCTCAGTATGTGATATTTGAATTTTTGATCATTCAAAACAATAAAATTGGAAGCCCTAACTTTTAGGCTACAATAATATTCAC

Network for GWHGAAEX002582

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13334.5	DUF4094	14	117	3.60E-26
PF01762.20	Galactosyl_T	153	350	4.90E-47

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT31

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006486	Biological Process	protein glycosylation
GO:0008378	Molecular Function	galactosyltransferase activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	78.950
SRP064423	SRR2545915	Juvenile tuber	115.400
SRP108465	SRR5643513	five period of Gastrodia elata	55.340
	SRR5643514	five period of Gastrodia elata	50.670
	SRR5643515	five period of Gastrodia elata	88.950
	SRR5643524	five period of Gastrodia elata	57.100
	SRR5643525	five period of Gastrodia elata	76.110
	SRR5643528	five period of Gastrodia elata	176.920
	SRR5643658	five period of Gastrodia elata	86.470
	SRR5643659	five period of Gastrodia elata	82.380
	SRR5643660	five period of Gastrodia elata	61.220
	SRR5643661	five period of Gastrodia elata	79.400
	SRR5643662	five period of Gastrodia elata	77.540
	SRR5643663	five period of Gastrodia elata	60.150
	SRR5643664	five period of Gastrodia elata	80.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	48.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.010
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	46.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	49.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	49.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	55.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	60.290
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	51.740
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	49.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	61.860
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.320
SRP279888	Gastro	Gastrodia elata tuber	62.97
	Juven	Juvenile tuber	57.90
	Mother_Gastro	Mother tuber of Gastrodia elata	215.23
	Mother_Juven	Mother tuber of Juvenile	136.30