Detail information of GWHGAAEX002583/evm.TU.scaffold_121.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16591.00E-40Class 2 transcription repressor NC2, alpha subunit (DRAP1)
nrgi|672118075|ref|XP_008782237.1|3.44E-72PREDICTED: dr1-associated corepressor homolog isoform X1 [Phoenix dactylifera]
Swissprottr|Q9ZVL3|NFYC3_ARATH2.00E-10Nuclear transcription factor Y subunit C-3
trEMBLtr|M0U268|M0U268_MUSAM1.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P21090_001}
TAIRAT3G124801.00E-40nuclear factor Y, subunit C11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012513299351354314+
Transcript Sequence

Network for GWHGAAEX002583

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.22CBFD_NFYB_HMF8719.00E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.050
SRR2545915Juvenile tuber14.850
SRP108465SRR5643513five period of Gastrodia elata15.020
SRR5643514five period of Gastrodia elata12.460
SRR5643515five period of Gastrodia elata17.240
SRR5643524five period of Gastrodia elata14.970
SRR5643525five period of Gastrodia elata15.660
SRR5643528five period of Gastrodia elata15.790
SRR5643658five period of Gastrodia elata11.480
SRR5643659five period of Gastrodia elata10.430
SRR5643660five period of Gastrodia elata11.130
SRR5643661five period of Gastrodia elata13.920
SRR5643662five period of Gastrodia elata12.650
SRR5643663five period of Gastrodia elata9.170
SRR5643664five period of Gastrodia elata11.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.900
SRR6049655Rhizomagastrodiae_C368-T10_good_111.310
SRR6049656Rhizomagastrodiae_C368-T07_good_110.260
SRR6049657Rhizomagastrodiae_C368-T07_good_111.220
SRR6049658Rhizomagastrodiae_C368-T04_good_110.590
SRR6049659Rhizomagastrodiae_C368-T04_good_111.530
SRR6049660Rhizomagastrodiae_C368-T01_good_110.640
SRR6049661Rhizomagastrodiae_C368-T04_good_111.280
SRR6049662Rhizomagastrodiae_C368-T01_good_111.010
SRR6049663Rhizomagastrodiae_C368-T01_good_111.950
SRR6049664Rhizomagastrodiae_C368-T10_good_113.430
SRR6049665Rhizomagastrodiae_C368-T10_good_113.430
SRP279888GastroGastrodia elata tuber 12.02
JuvenJuvenile tuber12.33
Mother_GastroMother tuber of Gastrodia elata 35.54
Mother_JuvenMother tuber of Juvenile 28.57