Detail information of GWHGAAEX002585/evm.TU.scaffold_121.47
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|296100453|ref|YP_003610599.1| | 3.00E-37 | carbonic anhydrase [Enterobacter cloacae subsp. cloacae ATCC 13047] |
| KOG | KOG0382 | 2.00E-77 | Carbonic anhydrase |
| nr | gi|743772560|ref|XP_010916592.1| | 1.83E-99 | PREDICTED: alpha carbonic anhydrase 7-like [Elaeis guineensis] |
| Swissprot | tr|Q8L817|ATCA7_ARATH | 5.00E-78 | Alpha carbonic anhydrase 7 (Precursor) |
| trEMBL | tr|M0SW01|M0SW01_MUSAM | 6.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P05720_001} |
| TAIR | AT1G08080 | 2.00E-77 | alpha carbonic anhydrase 7 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000125 | 1393504 | 1397452 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002585
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00194.20 | Carb_anhydrase | 39 | 264 | 6.40E-42 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01674 | cah | Metabolic pathways | map01100 |
| Nitrogen metabolism | map00910 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0004089 | Molecular Function | carbonate dehydratase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.840 |
| SRR2545915 | Juvenile tuber | 4.480 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.070 |
| SRR5643514 | five period of Gastrodia elata | 20.800 | |
| SRR5643515 | five period of Gastrodia elata | 9.240 | |
| SRR5643524 | five period of Gastrodia elata | 13.560 | |
| SRR5643525 | five period of Gastrodia elata | 5.400 | |
| SRR5643528 | five period of Gastrodia elata | 3.310 | |
| SRR5643658 | five period of Gastrodia elata | 4.930 | |
| SRR5643659 | five period of Gastrodia elata | 1.580 | |
| SRR5643660 | five period of Gastrodia elata | 0.730 | |
| SRR5643661 | five period of Gastrodia elata | 0.410 | |
| SRR5643662 | five period of Gastrodia elata | 1.790 | |
| SRR5643663 | five period of Gastrodia elata | 0.810 | |
| SRR5643664 | five period of Gastrodia elata | 0.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.760 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.400 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.100 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.180 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.520 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.740 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 35.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 35.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.46 |
| Juven | Juvenile tuber | 16.43 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.06 | |
| Mother_Juven | Mother tuber of Juvenile | 8.17 |