Detail information of GWHGAAEX002593/evm.TU.scaffold_121.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743848762|ref|XP_010939445.1|2.01E-40PREDICTED: cyclin-dependent kinase inhibitor 1-like [Elaeis guineensis]
Swissprottr|Q9FKB5|KRP3_ARATH9.00E-21Cyclin-dependent kinase inhibitor 3
trEMBLtr|M0SA78|M0SA78_MUSAM6.00E-34Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22370_001}
TAIRAT5G488203.00E-20inhibitor/interactor with cyclin-dependent kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012515723701573364+
Transcript Sequence

Network for GWHGAAEX002593

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02234.18CDI1902346.20E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007050Biological Processcell cycle arrest
GO:0004861Molecular Functioncyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.140
SRR2545915Juvenile tuber39.580
SRP108465SRR5643513five period of Gastrodia elata104.350
SRR5643514five period of Gastrodia elata87.090
SRR5643515five period of Gastrodia elata127.270
SRR5643524five period of Gastrodia elata90.990
SRR5643525five period of Gastrodia elata170.010
SRR5643528five period of Gastrodia elata113.520
SRR5643658five period of Gastrodia elata153.960
SRR5643659five period of Gastrodia elata138.330
SRR5643660five period of Gastrodia elata119.560
SRR5643661five period of Gastrodia elata139.720
SRR5643662five period of Gastrodia elata173.270
SRR5643663five period of Gastrodia elata133.600
SRR5643664five period of Gastrodia elata366.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1166.840
SRR6049655Rhizomagastrodiae_C368-T10_good_190.250
SRR6049656Rhizomagastrodiae_C368-T07_good_1146.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1141.440
SRR6049658Rhizomagastrodiae_C368-T04_good_1119.890
SRR6049659Rhizomagastrodiae_C368-T04_good_1116.940
SRR6049660Rhizomagastrodiae_C368-T01_good_1191.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1112.550
SRR6049662Rhizomagastrodiae_C368-T01_good_1105.030
SRR6049663Rhizomagastrodiae_C368-T01_good_1193.820
SRR6049664Rhizomagastrodiae_C368-T10_good_1130.210
SRR6049665Rhizomagastrodiae_C368-T10_good_1130.210
SRP279888GastroGastrodia elata tuber 147.08
JuvenJuvenile tuber68.72
Mother_GastroMother tuber of Gastrodia elata 373.55
Mother_JuvenMother tuber of Juvenile 195.38