Gene detail

Detail information of GWHGAAEX002595/evm.TU.scaffold_121.60_evm.TU.scaffold_121.61

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743860490\|ref\|XP_010943021.1\|	5.99E-119	PREDICTED: uncharacterized protein LOC105060867 isoform X3 [Elaeis guineensis]
trEMBL	tr\|M0UBJ0\|M0UBJ0_MUSAM	7.00E-112	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP22820_001}
TAIR	AT4G33380	2.00E-79	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000125	1584632	1605718	+

Transcript Sequence
>GWHTAAEX002595 GCAGGCGATTTCAGTGCGTGTGCGACTTTTGTGCACTTGTGGATTGCTGAGGTCACCGGCGGTGGTGCAGGTTCAATGGGAAGAATGGCAAAGAGTTTCTCTGAGTGGGCGAGGGGAGGAAATGCCTGCTCGTGTAAATGGGCGACTATCTCGATCTGTTTCTTCAATCTCCTGGCCGCAATCTACGTTCTCCATTCTTTGAACATCTTCCCTTCGCATCCCAGCGGTATCTGGCTTGCGGTAGATCAAGCCAAGAGGGTTGAAGAGGCGGCTGCCGTTCGGCGAGCGTTCGGGCATCTAGAGCTTGTTAAACTGGTGGGGAGACTGAACGCAAATTTACACGGTGAAGAACACGGGTCATTAGAGTTATCGCTGTCCGTGAAGACCAAGCTTGCTGATGAAATTCTGCTCAGGCTCAGAGAGTTAGGTGACGGTGCTAATGCGACCGAGCAACAAGAAGCTCTTGGATTATGGCATGCTGAGAAGTTGAAAGCATTGAGACAGATATTGCCAATTTCAAAAGATGGGTCAAACATGGCTGCTAAAGATGGGTCAAGCATGTCTGCAAAAGAATTAAAGATGCTTGCAAGTGCTTTGCAATCTGATTGGTTGAAGCTACTAGAAGATATTGGGCTTTGGATTCCAGCAGTTGTTACGAATAATGAGATAAATGACAGACCTAATAATGCAACCGATTCTGATGAGGATATAGATTCTGGACCTCCTCCTCCAGCAGAGTGCCATCCGGAACCTCATACTGATTATGATGGGGCTGCTGTTAGATGGGGTCTGACCCATCATAAATCAACTGCTGCTGATTGCTGTCAGGCATGCATTGACCAGGCAAAGAATGCAAAGTTAGGTCAGTTAAAGTGCAATATCTGGGTATATTGCCCTTCAAAGTTTGGATGCTATTCACCTGACATTTATCAACATCGATACCAGGAGTGCTGGCTTAAGCAGGCTTCGAATCCCCGGCGGAATTTCAAAGACAAGTACTCGGAAGCTTACAGAGATTCCCACCCAACAGCACCTGTCGCTGTTCCCTGGATCTCTGGTGTTATTAATTCATGATTTGAAGGGGTTCTCTCTTCTTAAAAAGCTGGGATCCGCCAAGGCAGAATCTGCTTTGGCTACATAATTTATCCCTAAAATATTTTGCTTGAAATTTCATATAGACCAGCAGAGCAGCCCCTCACCATCGTATTATCACATCACTTTGTAAGAGTTTCTTAGTTTTCCTTTTTAGTATTGTAAATTTTATTAGAATTCTACTTTATTATGGCACGAATGTTTTAGCAGCAGAAATTTTTGGCATTATGCTAGCCTCTTGCAGATTGGCTACAAGTGTAATTAAGTTTATTTTACTACAACTACTAGTGATTATAAAGATACATCCTGTTTTCATATTTATTTTTCCCATAAGTTCGTTATTGGTTACTC

Network for GWHGAAEX002595

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.490
SRP064423	SRR2545915	Juvenile tuber	1.240
SRP108465	SRR5643513	five period of Gastrodia elata	7.920
	SRR5643514	five period of Gastrodia elata	5.190
	SRR5643515	five period of Gastrodia elata	5.130
	SRR5643524	five period of Gastrodia elata	5.560
	SRR5643525	five period of Gastrodia elata	3.610
	SRR5643528	five period of Gastrodia elata	4.810
	SRR5643658	five period of Gastrodia elata	3.620
	SRR5643659	five period of Gastrodia elata	4.600
	SRR5643660	five period of Gastrodia elata	2.450
	SRR5643661	five period of Gastrodia elata	4.060
	SRR5643662	five period of Gastrodia elata	1.690
	SRR5643663	five period of Gastrodia elata	1.840
	SRR5643664	five period of Gastrodia elata	1.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.940
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.780
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.780
SRP279888	Gastro	Gastrodia elata tuber	2.87
	Juven	Juvenile tuber	4.64
	Mother_Gastro	Mother tuber of Gastrodia elata	3.32
	Mother_Juven	Mother tuber of Juvenile	3.70