Detail information of GWHGAAEX002596/evm.TU.scaffold_121.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26590LisH motif-containing protein
nrgi|743772657|ref|XP_010916643.1|0PREDICTED: uncharacterized protein LOC105041379 isoform X2 [Elaeis guineensis]
trEMBLtr|M0SA77|M0SA77_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22360_001}
TAIRAT5G668100Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012516140441655285+
Transcript Sequence

Network for GWHGAAEX002596

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10607.8CLTH691891.30E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.300
SRR2545915Juvenile tuber15.420
SRP108465SRR5643513five period of Gastrodia elata18.380
SRR5643514five period of Gastrodia elata16.290
SRR5643515five period of Gastrodia elata18.490
SRR5643524five period of Gastrodia elata14.720
SRR5643525five period of Gastrodia elata19.670
SRR5643528five period of Gastrodia elata17.760
SRR5643658five period of Gastrodia elata26.260
SRR5643659five period of Gastrodia elata15.060
SRR5643660five period of Gastrodia elata15.280
SRR5643661five period of Gastrodia elata14.540
SRR5643662five period of Gastrodia elata14.550
SRR5643663five period of Gastrodia elata15.510
SRR5643664five period of Gastrodia elata17.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.090
SRR6049655Rhizomagastrodiae_C368-T10_good_121.510
SRR6049656Rhizomagastrodiae_C368-T07_good_114.610
SRR6049657Rhizomagastrodiae_C368-T07_good_118.430
SRR6049658Rhizomagastrodiae_C368-T04_good_117.640
SRR6049659Rhizomagastrodiae_C368-T04_good_118.840
SRR6049660Rhizomagastrodiae_C368-T01_good_114.960
SRR6049661Rhizomagastrodiae_C368-T04_good_115.970
SRR6049662Rhizomagastrodiae_C368-T01_good_113.850
SRR6049663Rhizomagastrodiae_C368-T01_good_113.870
SRR6049664Rhizomagastrodiae_C368-T10_good_114.730
SRR6049665Rhizomagastrodiae_C368-T10_good_114.730
SRP279888GastroGastrodia elata tuber 17.73
JuvenJuvenile tuber18.62
Mother_GastroMother tuber of Gastrodia elata 27.47
Mother_JuvenMother tuber of Juvenile 28.07