Detail information of GWHGAAEX002609/evm.TU.scaffold_121.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479131578|ref|YP_005071538.1|1.00E-45patatin-like protein [Arthrospira platensis NIES-39]
KOGKOG05131.00E-150Ca2+-independent phospholipase A2
nrgi|672176870|ref|XP_008808514.1|0PREDICTED: patatin-like protein 2 [Phoenix dactylifera]
Swissprottr|Q6ZJD3|PLP2_ORYSJ5.00E-162Patatin-like protein 2
trEMBLtr|M0RLD8|M0RLD8_MUSAM2.00E-176Patatin {ECO:0000256|RuleBase:RU361262}
TAIRAT2G265601.00E-150phospholipase A 2A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012518974971915901+
Transcript Sequence

Network for GWHGAAEX002609

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01734.21Patatin242341.10E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.180
SRR2545915Juvenile tuber3.760
SRP108465SRR5643513five period of Gastrodia elata4.680
SRR5643514five period of Gastrodia elata2.360
SRR5643515five period of Gastrodia elata0.950
SRR5643524five period of Gastrodia elata2.530
SRR5643525five period of Gastrodia elata7.570
SRR5643528five period of Gastrodia elata10.170
SRR5643658five period of Gastrodia elata12.450
SRR5643659five period of Gastrodia elata0.290
SRR5643660five period of Gastrodia elata0.180
SRR5643661five period of Gastrodia elata0.090
SRR5643662five period of Gastrodia elata0.230
SRR5643663five period of Gastrodia elata0.030
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.030
SRR6049655Rhizomagastrodiae_C368-T10_good_114.080
SRR6049656Rhizomagastrodiae_C368-T07_good_15.930
SRR6049657Rhizomagastrodiae_C368-T07_good_14.690
SRR6049658Rhizomagastrodiae_C368-T04_good_13.620
SRR6049659Rhizomagastrodiae_C368-T04_good_12.210
SRR6049660Rhizomagastrodiae_C368-T01_good_14.600
SRR6049661Rhizomagastrodiae_C368-T04_good_18.390
SRR6049662Rhizomagastrodiae_C368-T01_good_14.370
SRR6049663Rhizomagastrodiae_C368-T01_good_12.050
SRR6049664Rhizomagastrodiae_C368-T10_good_17.550
SRR6049665Rhizomagastrodiae_C368-T10_good_17.550
SRP279888GastroGastrodia elata tuber 0.22
JuvenJuvenile tuber0.41
Mother_GastroMother tuber of Gastrodia elata 3.42
Mother_JuvenMother tuber of Juvenile 2.78