Detail information of GWHGAAEX002610/evm.TU.scaffold_121.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307595323|ref|YP_003901640.1|2.00E-32CutA1 divalent ion tolerance protein [Vulcanisaeta distributa DSM 14429]
KOGKOG33383.00E-62Divalent cation tolerance-related protein
nrgi|743772731|ref|XP_010916678.1|9.14E-89PREDICTED: protein CutA 1, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q109R6|CUTA1_ORYSJ1.00E-65Protein CutA 1, chloroplastic (Precursor)
trEMBLtr|M0S814|M0S814_MUSAM1.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P14730_001}
TAIRAT2G337403.00E-62Nitrogen regulatory PII-like, alpha/beta

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012519490781972653+
Transcript Sequence

Network for GWHGAAEX002610

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03091.14CutA1861832.60E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0010038Biological Processresponse to metal ion

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2202.230
SRR2545915Juvenile tuber1277.940
SRP108465SRR5643513five period of Gastrodia elata572.480
SRR5643514five period of Gastrodia elata412.050
SRR5643515five period of Gastrodia elata513.510
SRR5643524five period of Gastrodia elata416.700
SRR5643525five period of Gastrodia elata542.890
SRR5643528five period of Gastrodia elata473.390
SRR5643658five period of Gastrodia elata503.830
SRR5643659five period of Gastrodia elata1112.280
SRR5643660five period of Gastrodia elata1114.390
SRR5643661five period of Gastrodia elata1151.060
SRR5643662five period of Gastrodia elata1171.530
SRR5643663five period of Gastrodia elata1159.160
SRR5643664five period of Gastrodia elata1457.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11062.250
SRR6049655Rhizomagastrodiae_C368-T10_good_1626.570
SRR6049656Rhizomagastrodiae_C368-T07_good_1826.210
SRR6049657Rhizomagastrodiae_C368-T07_good_11185.860
SRR6049658Rhizomagastrodiae_C368-T04_good_11329.090
SRR6049659Rhizomagastrodiae_C368-T04_good_11430.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1965.450
SRR6049661Rhizomagastrodiae_C368-T04_good_11036.570
SRR6049662Rhizomagastrodiae_C368-T01_good_1548.310
SRR6049663Rhizomagastrodiae_C368-T01_good_1758.630
SRR6049664Rhizomagastrodiae_C368-T10_good_1570.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1570.360
SRP279888GastroGastrodia elata tuber 1,496.79
JuvenJuvenile tuber1,093.10
Mother_GastroMother tuber of Gastrodia elata 329.08
Mother_JuvenMother tuber of Juvenile 483.20