Detail information of GWHGAAEX002612/evm.TU.scaffold_121.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743801450|ref|XP_010926353.1|3.21E-33PREDICTED: transcription factor bHLH143-like [Elaeis guineensis]
Swissprottr|Q9FGB0|BH145_ARATH3.00E-13Transcription factor bHLH145
trEMBLtr|M0RRS0|M0RRS0_MUSAM3.00E-25Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12900_001}
TAIRAT5G500101.00E-12sequence-specific DNA binding transcription factors;transcription regulators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012520187202020455+
Transcript Sequence

Network for GWHGAAEX002612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.370
SRR2545915Juvenile tuber18.810
SRP108465SRR5643513five period of Gastrodia elata22.440
SRR5643514five period of Gastrodia elata16.510
SRR5643515five period of Gastrodia elata18.890
SRR5643524five period of Gastrodia elata13.860
SRR5643525five period of Gastrodia elata127.070
SRR5643528five period of Gastrodia elata92.680
SRR5643658five period of Gastrodia elata84.530
SRR5643659five period of Gastrodia elata14.840
SRR5643660five period of Gastrodia elata9.060
SRR5643661five period of Gastrodia elata11.580
SRR5643662five period of Gastrodia elata17.770
SRR5643663five period of Gastrodia elata24.600
SRR5643664five period of Gastrodia elata24.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.190
SRR6049655Rhizomagastrodiae_C368-T10_good_132.410
SRR6049656Rhizomagastrodiae_C368-T07_good_119.780
SRR6049657Rhizomagastrodiae_C368-T07_good_116.660
SRR6049658Rhizomagastrodiae_C368-T04_good_117.200
SRR6049659Rhizomagastrodiae_C368-T04_good_116.650
SRR6049660Rhizomagastrodiae_C368-T01_good_118.130
SRR6049661Rhizomagastrodiae_C368-T04_good_119.000
SRR6049662Rhizomagastrodiae_C368-T01_good_122.620
SRR6049663Rhizomagastrodiae_C368-T01_good_117.630
SRR6049664Rhizomagastrodiae_C368-T10_good_133.420
SRR6049665Rhizomagastrodiae_C368-T10_good_133.420
SRP279888GastroGastrodia elata tuber 18.44
JuvenJuvenile tuber15.14
Mother_GastroMother tuber of Gastrodia elata 25.84
Mother_JuvenMother tuber of Juvenile 13.36