Detail information of GWHGAAEX002633/evm.TU.scaffold_121.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|7.00E-28serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06988.00E-134Serine/threonine protein phosphatase
nrgi|672117923|ref|XP_008782156.1|8.13E-159PREDICTED: probable protein phosphatase 2C 41 isoform X1 [Phoenix dactylifera]
Swissprottr|Q7XQU7|P2C41_ORYSJ1.00E-142Probable protein phosphatase 2C 41
trEMBLtr|M0T5T6|M0T5T6_MUSAM3.00E-150Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P10370_001}
TAIRAT1G347508.00E-134Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012523812822411952-
Transcript Sequence

Network for GWHGAAEX002633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C632751.10E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.920
SRR2545915Juvenile tuber19.860
SRP108465SRR5643513five period of Gastrodia elata13.030
SRR5643514five period of Gastrodia elata11.710
SRR5643515five period of Gastrodia elata12.710
SRR5643524five period of Gastrodia elata11.210
SRR5643525five period of Gastrodia elata14.320
SRR5643528five period of Gastrodia elata14.650
SRR5643658five period of Gastrodia elata12.830
SRR5643659five period of Gastrodia elata11.420
SRR5643660five period of Gastrodia elata11.410
SRR5643661five period of Gastrodia elata12.360
SRR5643662five period of Gastrodia elata12.820
SRR5643663five period of Gastrodia elata11.240
SRR5643664five period of Gastrodia elata12.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.990
SRR6049655Rhizomagastrodiae_C368-T10_good_120.010
SRR6049656Rhizomagastrodiae_C368-T07_good_113.870
SRR6049657Rhizomagastrodiae_C368-T07_good_114.980
SRR6049658Rhizomagastrodiae_C368-T04_good_116.790
SRR6049659Rhizomagastrodiae_C368-T04_good_118.280
SRR6049660Rhizomagastrodiae_C368-T01_good_114.620
SRR6049661Rhizomagastrodiae_C368-T04_good_115.960
SRR6049662Rhizomagastrodiae_C368-T01_good_112.370
SRR6049663Rhizomagastrodiae_C368-T01_good_114.740
SRR6049664Rhizomagastrodiae_C368-T10_good_115.600
SRR6049665Rhizomagastrodiae_C368-T10_good_115.600
SRP279888GastroGastrodia elata tuber 15.65
JuvenJuvenile tuber9.97
Mother_GastroMother tuber of Gastrodia elata 19.38
Mother_JuvenMother tuber of Juvenile 10.99