Detail information of GWHGAAEX002639/evm.TU.scaffold_121.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|325294259|ref|YP_004280773.1|1.00E-70acetyl-CoA carboxylase, biotin carboxylase [Desulfurobacterium thermolithotrophum DSM 11699]
KOGKOG03680Acetyl-CoA carboxylase
nrgi|743773162|ref|XP_010916914.1|0PREDICTED: acetyl-CoA carboxylase 1-like [Elaeis guineensis]
Swissprottr|Q8S6N5|ACC1_ORYSJ0Biotin carboxylase
trEMBLtr|M0RJH5|M0RJH5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19000_001}
TAIRAT1G361600acetyl-CoA carboxylase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012526475462667608+
Transcript Sequence

Network for GWHGAAEX002639

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00289.21Biotin_carb_N391578.70E-30
PF02786.16CPSase_L_D22064024.70E-40
PF02785.18Biotin_carb_C4495554.40E-21
PF00364.21Biotin_lipoyl7097721.40E-08
PF08326.11ACC_central77315232.10E-193
PF01039.21Carboxyl_trans162721796.50E-167
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11262ACACA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Fatty acid metabolismmap01212
Pyruvate metabolismmap00620
Propanoate metabolismmap00640
Fatty acid biosynthesismap00061
Aflatoxin biosynthesismap00254
AMPK signaling pathwaymap04152
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0005524Molecular FunctionATP binding
GO:0016874Molecular Functionligase activity
GO:0003989Molecular Functionacetyl-CoA carboxylase activity
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms125.960
SRR2545915Juvenile tuber92.370
SRP108465SRR5643513five period of Gastrodia elata47.570
SRR5643514five period of Gastrodia elata47.950
SRR5643515five period of Gastrodia elata50.430
SRR5643524five period of Gastrodia elata58.460
SRR5643525five period of Gastrodia elata48.230
SRR5643528five period of Gastrodia elata121.200
SRR5643658five period of Gastrodia elata54.250
SRR5643659five period of Gastrodia elata57.890
SRR5643660five period of Gastrodia elata67.110
SRR5643661five period of Gastrodia elata59.290
SRR5643662five period of Gastrodia elata51.780
SRR5643663five period of Gastrodia elata55.400
SRR5643664five period of Gastrodia elata59.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.580
SRR6049655Rhizomagastrodiae_C368-T10_good_135.460
SRR6049656Rhizomagastrodiae_C368-T07_good_145.950
SRR6049657Rhizomagastrodiae_C368-T07_good_164.450
SRR6049658Rhizomagastrodiae_C368-T04_good_167.500
SRR6049659Rhizomagastrodiae_C368-T04_good_175.640
SRR6049660Rhizomagastrodiae_C368-T01_good_159.990
SRR6049661Rhizomagastrodiae_C368-T04_good_167.840
SRR6049662Rhizomagastrodiae_C368-T01_good_139.730
SRR6049663Rhizomagastrodiae_C368-T01_good_141.600
SRR6049664Rhizomagastrodiae_C368-T10_good_141.900
SRR6049665Rhizomagastrodiae_C368-T10_good_141.900
SRP279888GastroGastrodia elata tuber 56.26
JuvenJuvenile tuber82.85
Mother_GastroMother tuber of Gastrodia elata 79.00
Mother_JuvenMother tuber of Juvenile 91.86