Detail information of GWHGAAEX002641/evm.TU.scaffold_121.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|84490081|ref|YP_448313.1|1.00E-31hypothetical protein Msp_1293 [Methanosphaera stadtmanae DSM 3091]
KOGKOG31546.00E-85Uncharacterized conserved protein
nrgi|728833815|gb|KHG13258.1|2.60E-99putative ribosome biogenesis C16orf42 [Gossypium arboreum]
trEMBLtr|B9SSM1|B9SSM1_RICCO2.00E-96Probable ribosome biogenesis protein RCOM_0985520 {ECO:0000256|HAMAP-Rule:MF_03146}
TAIRAT5G100706.00E-85RNase L inhibitor protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012527008952750922+
Transcript Sequence

Network for GWHGAAEX002641

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04034.12Ribo_biogen_C681977.00E-50
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.610
SRR2545915Juvenile tuber57.850
SRP108465SRR5643513five period of Gastrodia elata7.130
SRR5643514five period of Gastrodia elata11.180
SRR5643515five period of Gastrodia elata7.330
SRR5643524five period of Gastrodia elata7.280
SRR5643525five period of Gastrodia elata13.410
SRR5643528five period of Gastrodia elata38.610
SRR5643658five period of Gastrodia elata49.470
SRR5643659five period of Gastrodia elata8.100
SRR5643660five period of Gastrodia elata18.060
SRR5643661five period of Gastrodia elata15.220
SRR5643662five period of Gastrodia elata7.380
SRR5643663five period of Gastrodia elata11.050
SRR5643664five period of Gastrodia elata9.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.040
SRR6049655Rhizomagastrodiae_C368-T10_good_117.000
SRR6049656Rhizomagastrodiae_C368-T07_good_126.790
SRR6049657Rhizomagastrodiae_C368-T07_good_127.950
SRR6049658Rhizomagastrodiae_C368-T04_good_128.210
SRR6049659Rhizomagastrodiae_C368-T04_good_138.980
SRR6049660Rhizomagastrodiae_C368-T01_good_125.540
SRR6049661Rhizomagastrodiae_C368-T04_good_128.220
SRR6049662Rhizomagastrodiae_C368-T01_good_121.100
SRR6049663Rhizomagastrodiae_C368-T01_good_126.470
SRR6049664Rhizomagastrodiae_C368-T10_good_126.810
SRR6049665Rhizomagastrodiae_C368-T10_good_126.810
SRP279888GastroGastrodia elata tuber 38.33
JuvenJuvenile tuber34.78
Mother_GastroMother tuber of Gastrodia elata 27.51
Mother_JuvenMother tuber of Juvenile 16.46