Gene detail

Detail information of GWHGAAEX002653/evm.TU.scaffold_121.128

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695052034\|ref\|XP_009414064.1\|	2.18E-135	PREDICTED: golgin candidate 2 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|B0F9L7\|GOGC2_ARATH	5.00E-11	Golgin candidate 2
trEMBL	tr\|M0TSW7\|M0TSW7_MUSAM	2.00E-117	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P23140_001}
TAIR	AT1G18190	2.00E-10	golgin candidate 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000125	3015606	3018049	+

Transcript Sequence
>GWHTAAEX002653 TTAGATTTGTCATGAAAGTAACAATAACAATAGTCTGATAAAGGAGAATGTTAAGCACATTAAGTATACATAATAAAGAATTAAAATACCAGAGATAATGATAAAATTTGTAATAAGAATTTTAAAATTGAGACGAAAAGTGATATCCTAAGAAATGATTTTTTTTGGGACTTTTTGTTCTTTCAAAAATCATAGTAAATGTTGGTTTTCATTCTGCATCGATTTGCCGAAGCGCAAAAAGCGAAATCAATACTCTCCTCCCGTCCAGAGTAATGGCGGGCTGGATCTCGTCTAAACTTAAAGTCGCCGAGAACCTCCTGCAGCAAATCGATCAGCAAGCCGCAGAATCTCTTGGCAAGGCGGACAATCCCAGCCGCTTCGCTTACGCTGCTGATCTCGTTTCTGTCGAAGCCGACTACGATGGACCACCGCATTCCGGAGAATCACCAATCTCTTCCGCAAAATTTCCCCTTCTTAAAAAATCAGCTCCGGATCTCACCAAGGTATCCTCCACACCACCCCCATCCTTCTCTTCGACCTCCGCTAAACCTACTCCTGATCCAACTTTCATCGATTGGACGGAGCTACTTAGCTCTCCCAGTCCGATCGTTCCGGCGACAGCTCCTCGCCCCGCCGACGGAACTTCTGTGCCACGCCCTTCGCCTCTGAGATTTGATAAGAAACCCGCTGTCTCGAAAAAAATCCCTTCTTTGTCTTCCTTCTCTTCTCCAGTTTTTCCTTCTTTTAAAGAAGATCGAAATGGTGAGAATGATGACTCCCGATCAAGGAGATTAGAGACTTCTCTTTTGCCAGGAAGCGAAGCTAGGAATTTAGGAATAGGCACTGATTTGAATCAGAGTAAGCAGGAAGGTGCAGAGGATATTGCAGATGATTTTCAATTTAACAATGTTCCGGCGAACCATTCTTCAAGGAGCGATAGGGATTCTGATTTAGATACATCACTGTCTTCAGGTTCTGATTCTGAGGACGAGGCCCGGAGGAGGAACACAGAGAAGAGAAGGAAACGAAAGGAGCATATTCTCGCTGAAAAAGCAGCCAGAGCTGCTGCAGATGCGATTAAGGAGAAGGAGGATATTGTTTCTAGATTGGAAAGAGAGAAGCGGAGTCTGGAGAAGATGCTCGAAGAAAGGGAGAGGCAGCAGGCCAAGGAAGCTTCGGAATTGCAGATGAGCATGATTGAGACCATGGAGGCTGTGGAGTTGGAGAAACAGAAGCACAACAGTACCAGAATGGAAGCCCTGGCTCGGTTGGCTGAGCTGGAGACCCAAAATGCAGAACTTGCAAAGTCGCTTGCAGCAGAACAATGGAATTTAGAAGTGTCGCTGAATCGCGTAGAAGAACTTAAACAACAGATTGGGTTGAAGGAACTTGCTCAAGAAGAACATAGGAGGAGATTGTCAACTATTAAGCAGAAAGCAGCTTCTCCAGCTATGATGGCACATATGAGAAAGGATAGGGTTGAGATTGAAATTCTGGATGCAGAATATACTTTTACTTGTGAGAAGATTGCAAGGCTAAAGGACAAGGCAGAGAAGCTTGAAGAAAACATTGAGAAAACAAAAAGGGAGATTATGCAACCCACTGAAGTGGAGCTTGAACTAAAGAAGAGGCTGAGTCAATTAACCGATCACTTGATTCAGAAACAAACCCAAGTTGAAGCCCTCTGCTCCGAGAAAGCAGCATTAATCTTTAGATTAGAGAAGCTGCTCCTCAATAAGAATGGGTTGTCAAGAGAGGATGGTGATTTGGAAAGTCTTGACGTTGAAGCTGGTGAATGGAAACATTCTAATTATGCTACAAAGGTAGCTCTTCGTGAGAGAATAAGATCCGGACGAAGACAACTTGGATTGGTTATCTGCCAGCTCGATGCTATTTTCACTGCTGGTGCATTATGTTTAAGGAGGAACACAATGGGACAACTATTTTCAGTTATATATCTTATATGCTTACACCTGTGGGCTTTGTATATACTTGGGTCACATTCAAAAGTTTCTGATGGAGCTGGTCATGGTGCTGTGTTCTCCTTGGAAAACATCAGCAATAACTCAGGCCACTAACATAAAATAGCATTTGATCTTTCTTGCTCAATTTCTGTTTTTTTGTGAATAATATTGCAAATGGTCTATGTAGTATTAGGCTGTTAAAAAAATTGGTGTTGAACATATGTTTTGCTTTTGAATTATGGACTCATGGAACAACACAAGTCATAATCAAACAGTTTGGTTTGAGTAAATATGTAGATTGTGTGCTTGGCTTTCTGTTAATCTCTTTTTTGCCAGTATATAAGCTGGCAAAGTAACCATTGCTTGATAATATGATCTTTGACAAAAGGTTCATGCTTTTCTTGTACTTTTTGTGCCGATACTTTGTATTTTAATAGAAGCTGGCCAATAGTTACTTATTGCCATAATGCTGAGAATCAC

Network for GWHGAAEX002653

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09787.8	Golgin_A5	388	574	1.30E-18

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007030	Biological Process	Golgi organization

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.700
SRP064423	SRR2545915	Juvenile tuber	9.770
SRP108465	SRR5643513	five period of Gastrodia elata	11.630
	SRR5643514	five period of Gastrodia elata	10.830
	SRR5643515	five period of Gastrodia elata	10.760
	SRR5643524	five period of Gastrodia elata	11.000
	SRR5643525	five period of Gastrodia elata	13.350
	SRR5643528	five period of Gastrodia elata	14.520
	SRR5643658	five period of Gastrodia elata	15.930
	SRR5643659	five period of Gastrodia elata	8.160
	SRR5643660	five period of Gastrodia elata	8.390
	SRR5643661	five period of Gastrodia elata	8.960
	SRR5643662	five period of Gastrodia elata	9.290
	SRR5643663	five period of Gastrodia elata	7.740
	SRR5643664	five period of Gastrodia elata	7.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.930
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.500
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.450
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.260
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.290
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.680
SRP279888	Gastro	Gastrodia elata tuber	8.23
	Juven	Juvenile tuber	10.92
	Mother_Gastro	Mother tuber of Gastrodia elata	13.70
	Mother_Juven	Mother tuber of Juvenile	11.30