Detail information of GWHGAAEX002656/evm.TU.scaffold_121.131
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|182412686|ref|YP_001817752.1| | 2.00E-30 | major facilitator transporter [Opitutus terrae PB90-1] |
| KOG | KOG0637 | 0 | Sucrose transporter and related proteins |
| nr | gi|743773341|ref|XP_010917011.1| | 0 | PREDICTED: sucrose transport protein SUT3 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q10R54|SUT1_ORYSJ | 0 | Sucrose transport protein SUT1 |
| trEMBL | tr|M0RJG0|M0RJG0_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P18850_001} |
| TAIR | AT2G02860 | 0 | sucrose transporter 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000125 | 3068719 | 3074257 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002656
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module14 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13347.5 | MFS_2 | 56 | 133 | 1.20E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015770 | Biological Process | sucrose transport |
| GO:0008515 | Molecular Function | sucrose transmembrane transporter activity |
| GO:0005887 | Cellular Component | integral component of plasma membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 28.790 |
| SRR2545915 | Juvenile tuber | 14.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 38.660 |
| SRR5643514 | five period of Gastrodia elata | 27.440 | |
| SRR5643515 | five period of Gastrodia elata | 22.680 | |
| SRR5643524 | five period of Gastrodia elata | 23.090 | |
| SRR5643525 | five period of Gastrodia elata | 31.010 | |
| SRR5643528 | five period of Gastrodia elata | 55.680 | |
| SRR5643658 | five period of Gastrodia elata | 48.450 | |
| SRR5643659 | five period of Gastrodia elata | 13.650 | |
| SRR5643660 | five period of Gastrodia elata | 16.590 | |
| SRR5643661 | five period of Gastrodia elata | 20.830 | |
| SRR5643662 | five period of Gastrodia elata | 29.730 | |
| SRR5643663 | five period of Gastrodia elata | 12.700 | |
| SRR5643664 | five period of Gastrodia elata | 25.570 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 40.730 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 44.900 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 47.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 46.660 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 43.440 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 40.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 48.410 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 64.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 39.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 59.400 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 59.400 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 48.99 |
| Juven | Juvenile tuber | 23.42 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 97.01 | |
| Mother_Juven | Mother tuber of Juvenile | 15.35 |