Detail information of GWHGAAEX002666/evm.TU.scaffold_122.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08341.00E-171CDK9 kinase-activating protein cyclin T
nrgi|573961143|ref|XP_006662748.1|5.41E-179PREDICTED: cyclin-T1-3-like [Oryza brachyantha]
Swissprottr|Q2RAC5|CCT13_ORYSJ2.00E-179Cyclin-T1-3
trEMBLtr|J3N668|J3N668_ORYBR2.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:OB11G13040.1}
TAIRAT5G451901.00E-171Cyclin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000123407021421825+
Transcript Sequence

Network for GWHGAAEX002666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N321732.10E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms517.920
SRR2545915Juvenile tuber314.370
SRP108465SRR5643513five period of Gastrodia elata121.060
SRR5643514five period of Gastrodia elata99.780
SRR5643515five period of Gastrodia elata97.780
SRR5643524five period of Gastrodia elata86.810
SRR5643525five period of Gastrodia elata78.370
SRR5643528five period of Gastrodia elata52.590
SRR5643658five period of Gastrodia elata68.790
SRR5643659five period of Gastrodia elata192.920
SRR5643660five period of Gastrodia elata265.370
SRR5643661five period of Gastrodia elata220.320
SRR5643662five period of Gastrodia elata224.020
SRR5643663five period of Gastrodia elata214.250
SRR5643664five period of Gastrodia elata299.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1220.350
SRR6049655Rhizomagastrodiae_C368-T10_good_1138.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1155.110
SRR6049657Rhizomagastrodiae_C368-T07_good_1294.570
SRR6049658Rhizomagastrodiae_C368-T04_good_1221.920
SRR6049659Rhizomagastrodiae_C368-T04_good_1261.530
SRR6049660Rhizomagastrodiae_C368-T01_good_1231.360
SRR6049661Rhizomagastrodiae_C368-T04_good_1197.130
SRR6049662Rhizomagastrodiae_C368-T01_good_1112.490
SRR6049663Rhizomagastrodiae_C368-T01_good_1144.340
SRR6049664Rhizomagastrodiae_C368-T10_good_193.380
SRR6049665Rhizomagastrodiae_C368-T10_good_193.380
SRP279888GastroGastrodia elata tuber 174.64
JuvenJuvenile tuber144.03
Mother_GastroMother tuber of Gastrodia elata 51.97
Mother_JuvenMother tuber of Juvenile 89.80