Detail information of GWHGAAEX002671/evm.TU.scaffold_122.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|3.00E-63trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10501.00E-141Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|672134340|ref|XP_008790818.1|2.94E-163PREDICTED: probable trehalose-phosphate phosphatase 6 [Phoenix dactylifera]
Swissprottr|Q6ZAL2|TPP6_ORYSJ3.00E-147Probable trehalose-phosphate phosphatase 6
trEMBLtr|F6I7F4|F6I7F4_VITVI4.00E-158Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117} (Fragment)
TAIRAT5G651401.00E-141Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000123991702994247+
Transcript Sequence

Network for GWHGAAEX002671

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase853191.70E-72
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.400
SRR2545915Juvenile tuber4.090
SRP108465SRR5643513five period of Gastrodia elata53.990
SRR5643514five period of Gastrodia elata14.300
SRR5643515five period of Gastrodia elata41.220
SRR5643524five period of Gastrodia elata15.250
SRR5643525five period of Gastrodia elata53.320
SRR5643528five period of Gastrodia elata14.650
SRR5643658five period of Gastrodia elata52.110
SRR5643659five period of Gastrodia elata4.530
SRR5643660five period of Gastrodia elata3.460
SRR5643661five period of Gastrodia elata8.600
SRR5643662five period of Gastrodia elata20.040
SRR5643663five period of Gastrodia elata9.810
SRR5643664five period of Gastrodia elata18.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_178.730
SRR6049655Rhizomagastrodiae_C368-T10_good_1120.520
SRR6049656Rhizomagastrodiae_C368-T07_good_155.260
SRR6049657Rhizomagastrodiae_C368-T07_good_150.290
SRR6049658Rhizomagastrodiae_C368-T04_good_190.450
SRR6049659Rhizomagastrodiae_C368-T04_good_172.600
SRR6049660Rhizomagastrodiae_C368-T01_good_143.570
SRR6049661Rhizomagastrodiae_C368-T04_good_146.590
SRR6049662Rhizomagastrodiae_C368-T01_good_130.600
SRR6049663Rhizomagastrodiae_C368-T01_good_151.400
SRR6049664Rhizomagastrodiae_C368-T10_good_175.760
SRR6049665Rhizomagastrodiae_C368-T10_good_175.760
SRP279888GastroGastrodia elata tuber 3.21
JuvenJuvenile tuber20.67
Mother_GastroMother tuber of Gastrodia elata 7.14
Mother_JuvenMother tuber of Juvenile 8.95